Gene PHATRDRAFT_24120 details

Gene Information

• Locus tag: PHATRDRAFT_24120
• ID: 7199274
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: -
• Start bp: 165477
• End bp: 167618
• Gene Length: 2142 bp
• Protein Length: 568 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002185438
• Protein GI: 219130576

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCGCT ACCGTGGCTT TTGGTGGCAC CCCGACTCAT GCGGTATCCT GGTCGCCCGC 
GTCGACGAAT CGAGCGTCCC CGTTTACCGA ATCATGCACC AGGAAGTGGA AGATGGTCAC 
GCGTACGAAG ATCATCGCTA TCCTTTTGCC GGAAAAGAAA ATCCCACCGT CCGACTCGCC 
TTTGTACCGA TCGATTCCGT CTCCGTGGCA CAATCCTTGA CCGTGAATCG GAAAACGTCC 
ACTCCACCGA CAGAAGCCAC CGCCACGCAC TGCCACGACG ATGATACGCG GCAAGACGTG 
GACGGCAGTG AGGCTGGCGC CGATCCCATG GACGAAGACG ACGACCACGA ACTTTCGGCG 
CAAAGCATTG CCGATCTGGC TTGGGACAGT GTGGTATGGT TGGATCCACC CCGGGAGGCC 
ACGGAGTATC TCGCCCGCGT CTACTGGTTG CCCGATGGTT CTGCCGTGGC CCAGTGGCAG 
AATCGGACCC AAACCGTGAC GGTCTGGCAA CGGATACCCG TACTGGAAAC ACCGATACGA 
CCGCGGACGC TCGTCATGGA ACGCACCGAC GTGTGGATCA ATCTGCACCA CATGTTCCAC 
GTTTTACCGG AACCGGTTGC TCCCCAGCAG TGCGGAACGT CCGGACGCGA CCCTCAAATC 
CCGCCCTTTC CTGCACCCTT ACCGCCCGGA GCCTTTTCCT TTCTCCTCGC GTCCGAACGC 
AGCGGCTTTC AACATTTGTA CCTATACACG TATTGTCCGG GCATCAACGG CGAACAGGCA 
GTGCTGTTGC GGACCATCTC GGCGGGGGAA TGGATTGTGG AAAGTATCGT TGGTGTGGAT 
ATGGACAGGG ATGTCGTGTT CTTTACCGGC ACGTACGATT CAGTCCTGGA ACGACACTTG 
TACGCCTTGC CACTTACGTA TCGAGACGAA GTGGAGGGAT CCAATGAAGT ACGCGGTGAG 
GAACATCCAA CCGATCACAA CGGTGTCCGG CGAGGCTTGA GCAAAGTTAT GAGCGCTTTT 
TCTCCGGGAA AGCACCACAA GGTCAAAGCG AACGGTATGG ACTCTGACGG CGGGTCAACT 
GTACGCCCAA TTCGCTTGAC CGTGGACTCG GGAATGCACA GCATCGTGAT GGACGAGGAT 
TGTGAAATCT TTGCAGACAC TAGTAGTGAT CTAGATCGAC CAACGTCGGT CAAGATTTAC 
GAAGTGTCCA AGAACATTCT GGCGTGGAAC CAAAAGCCGA GCAGGACTCC CCCTGTCCAA 
TTGCTATTTA CGCTCTACGA TGCCATGAAT GACGACAAAT CCATGGTCGC CGAGGCGCTG 
GCGGCACAGT CCACGATTGG TCGCAGTGCC GGTAGTCGGT TACTAGCCAA TTTACCCGCA 
CCAGAACTGT TGAAATTCCC CACGTCGGAC GGGTCGGAAA TGCTGCACGC GGCACTTTAC 
CGCCCCGATG CTCGTATACA CGGCCCAGGT CCGTATCCCT TGATTTGTGC TGTTTATGGC 
GGTCCCCATG TCCAACGCGT GAACCGTTCG TGGTCACAGT GTGCCGATAT GCGAGCACAG 
CGACTGCGGA GTCTGGGTTT CTGCGTCGTC AAATGCGACA ATCGTGGTTC CTCCCGGCGA 
GGCCTGGCGT TCGAATCGGC AATTTCGCGG CGACTTGGTC GTCTTGAAGT GCTGGATCAA 
GTGGCTGCGG TACGACAACT CGCCGCCCGA GGTGTGGCCG ATCCTAACCG TGTGGGTATC 
TATGGCTGGT CCTATGGAGG CTATCTGTCG GCCATGTGCT TGTGTCGGGC ACCGGATGTG 
TTCCACGCAG CCGTTGCCGG TGCTCCGGTG ACCTCCTGGG ACGGCTACGA CACCCACTAC 
ACCGAGCGGT ATATGGGCCT ACCGTCCGAT AATCCGGCAG GATACCGCGA ATCGGCCTTG 
TTTGAACACA TTCCGAACAT GTCTGGGTCC TTGTTAATGA TCCACGGTTT GATTGACGAA 
AATGTACACT TTAGACACAC GGCGAGGCTC ATAAATAAGT TGGTGGCGTC CGGTAAGTCC 
TACGAGCTAT GCATCTTTCC CGACGAACGA CATTCGCCCC GACGATTACG GGATCGCATT 
TATATGGAGC AGCGCATTGG CGACTTTTTC GTAGAACGTT TG 

 

Protein sequence

MDRYRGFWWH PDSCGILVAR VDESSVPVYR IMHQEVEDGH AYEDHRYPFA GKENPTVRLA 
FVPIDSVSVA QSLTATEYLA RVYWLPDGSA VAQWQNRTQT VTVWQRIPVL ETPIRPRTLV 
MERTDVWINL HHMFHVLPEP VAPQQCGTSG RDPQIPPFPA PLPPGAFSFL LASERSGFQH 
LYLYTYCPGI NGEQAVLLRT ISAGEWIVES IVGVDMDRDV VFFTGTYDSV LERHLYALPL 
TYRDEVKANG MDSDGGSTVR PIRLTVDSGM HSIVMDEDCE IFADTSSDLD RPTSVKIYEV 
SKNILARLLA NLPAPELLKF PTSDGSEMLH AALYRPDARI HGPGPYPLIC AVYGGPHVQR 
VNRSWSQCAD MRAQRLRSLG FCVVKCDNRG SSRRGLAFES AISRRLGRLE VLDQVAAVRQ 
LAARGVADPN RVGIYGWSYG GYLSAMCLCR APDVFHAAVA GAPVTSWDGY DTHYTERYMG 
LPSDNPAGYR ESALFEHIPN MSGSLLMIHG LIDENVHFRH TARLINKLVA SGKSYELCIF 
PDERHSPRRL RDRIYMEQRI GDFFVERL