Gene PHATRDRAFT_16991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16991 
Symbol 
ID7199260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp103745 
End bp104896 
Gene Length1152 bp 
Protein Length384 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185427 
Protein GI219130553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.565969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACCTTGTAA GCGCATCCTT GATCTGTTCT GGACTGGGAA CAGTAATGCA AGTCAGTGCC 
ATTCCAATCC CCTTTACCAA GTATCAACTT GGAACAGGTA TTTTGAGTAC CATGGGAACT
GCGAATCAGT ATAACGCCAT CTTCCCGGTG ATCTTGTTCG ACATTGTGTC ACGTGGTTTT
ACCCTTGAGG AAGCGTGGGG TAAACTACTT GGTACGATCA TGGTTTGCGT CTGGCTAGAG
GCGCTGATTT CTCTCGCGCC CAACAAAATT CTACAACGAA TCTGTCCTCC CTACGTGCTT
GGCGTTACTG TCATGTTAAT CGGAGATCAA CTCACTGGCG CAGGAATCCG CTTTTGGGGA
GGCGGCGTGG GCTGCTCCGG CAACCCGAGT GCCGATAATC CGTGTCTAGG GAACGGTGAC
GTGCAACTCG GATACGTTTC CGGCCCCTAT ATTGGCCTAG GATTCTCCGT TTTTCTCATT
TTCTTGATTG TCGAGATTTT CGGAAGTCCG TTTATGCGGA ACACCATGGT GATTTGGGGG
CTCTTGGGTG GTTATGCTAT CTCGGCAATG GCAACTTACG AAGGGGATCG TTTTGTCACC
GCTGATCGCA TCAAGAGCAG CAGTGCTTTT ACATTCTTAT GGGTGGAGAC CTTTCCGATT
AGCATCTACG GTCCTGCCAT TATTCCTATA CTCTTTGCCT TTATGGTGAC TGCCATGGAA
ACCATGGGCG ACGTCACGGC TACCGAGCAT GCATCTCGTC TGCGCCCTTC GGGAGAGGCT
CATACTCGTC GTGTACAGGG CGGTTTGCTC GGCGATGCGG TCGCGACATT CTTTGCGGCC
CTGGGAACGA CTCCGCCCAA CACAACATTG TCACAAAACA ACGGCATTGT GGCCCTTACC
CGATGTGCTT CTACTTCTGC GGGCTACTCC TGCGGATTTT GGTTGCTGTG CTTTGGCGTG
CTTGCCAAGA TTGGAGGATG GATTTTGTCA ATCCCTGACT GCGTCCTGGG CGGAGCTCTC
ACTTTTCTGT TTGCCATCAT AATAGTGTCG GGCATCAAGC TCATTGGCTT TAGTCGCATT
GATCGTCGGA CGCACTACAT TGTGGCGACT TCGTTGGCGC TGGGAGTTGG CACTGCGCTG
GTTCCAGCGT GG
 
Protein sequence
YLVSASLICS GLGTVMQVSA IPIPFTKYQL GTGILSTMGT ANQYNAIFPV ILFDIVSRGF 
TLEEAWGKLL GTIMVCVWLE ALISLAPNKI LQRICPPYVL GVTVMLIGDQ LTGAGIRFWG
GGVGCSGNPS ADNPCLGNGD VQLGYVSGPY IGLGFSVFLI FLIVEIFGSP FMRNTMVIWG
LLGGYAISAM ATYEGDRFVT ADRIKSSSAF TFLWVETFPI SIYGPAIIPI LFAFMVTAME
TMGDVTATEH ASRLRPSGEA HTRRVQGGLL GDAVATFFAA LGTTPPNTTL SQNNGIVALT
RCASTSAGYS CGFWLLCFGV LAKIGGWILS IPDCVLGGAL TFLFAIIIVS GIKLIGFSRI
DRRTHYIVAT SLALGVGTAL VPAW