| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55187 |
|---|
| Symbol | DHKL |
|---|
| ID | 7199208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | - |
|---|
| Start bp | 242619 |
|---|
| End bp | 244347 |
|---|
| Gene Length | 1729 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | diatom histidine kinase like |
|---|
| Protein accession | XP_002185346 |
|---|
| Protein GI | 219130383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCA TTGGTGCCGC AGCAATAATT CTCGGAATGT CGCTGCTTTT CTTTTTGTAC
GACTTTTTCG TTCGTCGTGA ATTTCATGAG AAGCAGTCCG TACTGGAAGC CAAACGAACG
TTTGTGCGAT TTGTTTCTCA CGAAGTTCGA ACACCCTTGA ACACTGTGTG TATGGGGCTT
CGCTTACTCA AGGAAGAGCT GGTAGGAGTG TTATTGGGTT GTCCCCAAAC TCTTGATCAA
GGGCAGCCTG TCGATTCCCG ATCTCCAGCA GAATTGAAAG ACTCCTTGTT CGCGTTGAGT
GACGAAGTAT TGACAAACGC CGAAAGTGCC GTCGACATCC TGAATGACTT GTTGAATTAT
GACAAGATTG AAATGGGAAC ATTAATTCTG GAGCTGACAA CATTTCCAAT ATGGAAGCTC
ATTGAGCAGA TTAGTGCAGA ATTTGAATTG CCGGCGAAAT CCAAAAGTAT TTGTTTGAAA
CAGGATTGGA CCAGCTTGTT CAAAAGGAAA ACCAACGATA TAGAATGTAG CGGGGGAATC
TCGTCGCTCT CGACTGATTT TGCTGAATGT CGGTTTGTAG GAGATGCAGT TCGGATTACC
CAAGTTTTTC GAAATTTACT ATCGAACGCA ATCAAATTCA GTCATCGGGG AGGTAAGTTT
TATCATCGTC AGGAGTTGTC TGCCAAACCT CCAGAGCTAT GTCTCAGATC TCTTGTACAA
TTGGGGGTAG GATCAATAAT GATTCGTACG TCTTGGGTCA AGCCTAAAGA CCAACAGTGT
GTCGCAAAAG AATCCCTTGA CTGCTTTACT TTGAGTACTG GTGAAGAGGT CTGTTATCCT
CAAAATGGGC ACGTTCAAGT AGAAGTAATC GACACGGGAG TAGGCATGAC CAGAGAACAG
CTGGAAAAAC TGTTTCGACA CGGTGTTCAG TTCAACGCAA ACAATTTGCA ATCTGGTCAA
GGGAGCGGCC TTGGATTGTA CATAGCGAAA GGTATAGCCG AGCAACATGG TGGAACCTTA
ATTGCAACTT CCGCAGGGCT CAACAGGGGG ACAACCTTCA CGTTGGTTTT GCCCCTCCAC
AAAATCCCGA GTGATTGTCT TTCAACATCT TCAACGAAGT TCACGCTGGA CCAAGATTTT
GCGCAGATTC CGCACCTCAT TCAGCAGCAA CAGCCGACGG GAAATTTGCG CCTACTGATT
GTGGATGATG TCGCGATGAA CCGCAAGATA CTTAGACGTT TGCTTGAACA GAAAGGCCAT
GATTGCTTCG AAGCTGAAAA TGGTCAAACT GCAGTTGAAT TGGTGCAAAA GTCACTCAAC
GCCAAGCAAG GGTTTGATTC GATCCTTTTG GATTTTGAAA TGCCTATCAT GGATGGGCCG
TCTGCTTGTA GAAAGATGCG CGATATTGGT TGCCAATGCT GCATAGTTGG TATAACTGGA
AACATCTTGC CACATGATGT GGCGCTCTTC AAGCGCGCGG GTGCGGACAT GGTATTGCCT
AAACCACTTC ATATCGAGGC CCTTGAGGAT GTGTGGCTGG AATACGGCCT GACGGGTTGT
CTGACTTTCT CGAAGGATGC CACCATTGAT CATGATTTAG TCAATGAAAT CAGGCACTCC
ATCTAGCTTG TCATCGAGAC GAGATAGTCT CTGTCAATTA GTTTTTTGTT GGTACGGATC
GAATGCGTAT ATGGGGGCGG TCCGGTTTGT TGAAGGAATG ACATGTGGG
|
|---|
| Protein sequence | MAAIGAAAII LGMSLLFFLY DFFVRREFHE KQSVLEAKRT FVRFVSHEVR TPLNTVCMGL
RLLKEELVGV LLGCPQTLDQ GQPVDSRSPA ELKDSLFALS DEVLTNAESA VDILNDLLNY
DKIEMGTLIL ELTTFPIWKL IEQISAEFEL PAKSKSICLK QDWTSLFKRK TNDIECSGGI
SSLSTDFAEC RFVGDAVRIT QVFRNLLSNA IKFSHRGGKF YHRQELSAKP PELCLRSLVQ
LGVGSIMIRT SWVKPKDQQC VAKESLDCFT LSTGEEVCYP QNGHVQVEVI DTGVGMTREQ
LEKLFRHGVQ FNANNLQSGQ GSGLGLYIAK GIAEQHGGTL IATSAGLNRG TTFTLVLPLH
KIPSDCLSTS STKFTLDQDF AQIPHLIQQQ QPTGNLRLLI VDDVAMNRKI LRRLLEQKGH
DCFEAENGQT AVELVQKSLN AKQGFDSILL DFEMPIMDGP SACRKMRDIG CQCCIVGITG
NILPHDVALF KRAGADMVLP KPLHIEALED VWLEYGLTGC LTFSKDATID HDLVNEIRHS
I
|
|---|
| |