Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_52709 |
Symbol | |
ID | 7199194 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 130082 |
End bp | 130678 |
Gene Length | 597 bp |
Protein Length | 179 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185332 |
Protein GI | 219130354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACCTTATCT CAGCATTTGT CCATTGCCAT TCCAATTATT TTGTTATTCG TACTGTTCAA GCGGATCAGA TAATTGTTGA TCAAAGCGGT GTCGCCAAGC TTGGTGGCTT ATACCGAGGA ACCGTGATTC CAGTGAACGA ACGGCATAAA TCTCCCAACT TGGTCGAGGC TGCTAGGTCG AAGAAAAAAG ACGATAGGAA AAAGGACGAC GAGGACGTTT CCGCCAACCC CTATGCTGCT CCGGAAATTT TACTTGGATC CCCAAAATTC ACGATGGAGA GCGATATTTG GGCACTAGGA TGTCTTCTGG CGCAGCTGCT TTTAAGCAAA CCGCTCTTTG TTGGCAAGGA TCGGGTATCG TTGCTGACTG CACAGTACAA GATCGTCGGA ACCCCTTCAA AAAAGAACTT TCTGGAAGCA GCCAAGTTTC CCTACTATTT CAAACCAGCT AAAATGTACA AACGCGGTGT GGATCGAGCT CTTGGCCACA TGCTAAAGAA TCAGGGTGAA ACGCATACCA AAGCTATCAA TCTGATTGCC AGCATGCTAC ACTTGGACCC AAGCCAGCGG TGTACAGCGG CTGAAGCACT GGGGCAC
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Protein sequence | DLISAFVHCH SNYFVIRTVQ ADQIIVDQSG VAKLGGLYRG TKKDDRKKDD EDVSANPYAA PEILLGSPKF TMESDIWALG CLLAQLLLSK PLFVGKDRVS LLTAQYKIVG TPSKKNFLEA AKFPYYFKPA KMYKRGVDRA LGHMLKNQGE THTKAINLIA SMLHLDPSQR CTAAEALGH
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