Gene PHATRDRAFT_52709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52709 
Symbol 
ID7199194 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp130082 
End bp130678 
Gene Length597 bp 
Protein Length179 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185332 
Protein GI219130354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACCTTATCT CAGCATTTGT CCATTGCCAT TCCAATTATT TTGTTATTCG TACTGTTCAA 
GCGGATCAGA TAATTGTTGA TCAAAGCGGT GTCGCCAAGC TTGGTGGCTT ATACCGAGGA
ACCGTGATTC CAGTGAACGA ACGGCATAAA TCTCCCAACT TGGTCGAGGC TGCTAGGTCG
AAGAAAAAAG ACGATAGGAA AAAGGACGAC GAGGACGTTT CCGCCAACCC CTATGCTGCT
CCGGAAATTT TACTTGGATC CCCAAAATTC ACGATGGAGA GCGATATTTG GGCACTAGGA
TGTCTTCTGG CGCAGCTGCT TTTAAGCAAA CCGCTCTTTG TTGGCAAGGA TCGGGTATCG
TTGCTGACTG CACAGTACAA GATCGTCGGA ACCCCTTCAA AAAAGAACTT TCTGGAAGCA
GCCAAGTTTC CCTACTATTT CAAACCAGCT AAAATGTACA AACGCGGTGT GGATCGAGCT
CTTGGCCACA TGCTAAAGAA TCAGGGTGAA ACGCATACCA AAGCTATCAA TCTGATTGCC
AGCATGCTAC ACTTGGACCC AAGCCAGCGG TGTACAGCGG CTGAAGCACT GGGGCAC
 
Protein sequence
DLISAFVHCH SNYFVIRTVQ ADQIIVDQSG VAKLGGLYRG TKKDDRKKDD EDVSANPYAA 
PEILLGSPKF TMESDIWALG CLLAQLLLSK PLFVGKDRVS LLTAQYKIVG TPSKKNFLEA
AKFPYYFKPA KMYKRGVDRA LGHMLKNQGE THTKAINLIA SMLHLDPSQR CTAAEALGH