Gene PHATRDRAFT_51286 details

Gene Information

• Locus tag: PHATRDRAFT_51286
• Symbol: PFK_1
• ID: 7199226
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: +
• Start bp: 317053
• End bp: 319205
• Gene Length: 2153 bp
• Protein Length: 563 aa
• GC content: 54%
• Product: pyrophosphate-dependent phosphofructose kinase
• Protein accession: XP_002185307
• Protein GI: 219130302

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGAAAGCCGA CTCGCACTGG GACTCTAGTG TTCGGCCCGT TGGGGGGTGC CAATGATTCC 
TTAGTGGTTG ATTGATTGAT TGATTGATTC GTGTCCACGC TCCACCATGA ATGAGAGACG 
GAACCGCGCT TCTTGGCTGG TACTCGCCGT CACGGGGGGT CCGCTGCTGC TTTCGGTATC 
GTCACGGTGT TTCGTCGACG CCTTTTCTAT CGCGTCCTCC GTCTCGTCAC GGAGCTCGGC 
ACACATCGGC GATTCGTCGT CGGTGCGCTT TCTGTTTGCC GACGAGTGTT CGCTAAATAC 
TTTTGATGCG GAGGAGTGCA TTGCAACGGC AGGATACGTC CGCGACCCGA CGGAGGCCTC 
CAGCGTCGAC AACGTCTTGG TCGCTGAAAT CGAAACCTTG CGCGACAAAT TCACGTCGTT 
CGAAAACGTG GATGCACACG TAAAGACGAC CAATATGATC AAGTATTGTC GGAGAAGGGA 
AGGCAAACGA CTTTTGGCCT CGGATACAAT CGCTCCCTCC GTCAACTCGA GAATCGCCAA 
TATTGAATAC AATCATCTCA TTGAAGATCG GTACGTATCA AACAACGCCG TGTCGTGCGC 
CTACCGGTGA GCCACACCGA CTGCGCGCTA AATTGAAAAT TCTACTGACC CCACCGCCGT 
TGCTGGACTG TTGTAGAGAA CTCGTCTTGG TCGACACCGT TCGTGTTCCT GGTATGGACA 
AGTCGTCACG AGCGTTCCAC CGTGCCGGTC CCCGGAAATT GTTGCATTTC GATCCGTCGC 
TGGTCAACGC CGCCATTGTT ACCTGCGGTG GACTCTGCCC GGGTCTCAAC AACGTTATTC 
GTGAGCTCGT GCATTCTCTA CACAACTTGT ACGGCGCACA GAACGTCTGG GGCATTACCG 
GTGGCTACCA CGGCTTTCAC AATCCCGAAT ACGCACCCGT CTTGTTGACG AACGAAATGG 
TGGAAAACAT TCATCACGAA GGTGGGACCA TCTTGCGGAC ATCCCGGGGC GGATTTGAGA 
TCGACGCGAT AGTGTCATTC TTGCGTTCCA AGAGTATTTC GCAACTCTAC ATTATCGGTG 
GTGACGGTAC TCACCGAGGG TAAGTGCAGA ACGTTGTGGT TGTTGTCGTT GTTTTTTATG 
CTGTCGTTGT TGTTACTATT GTTGTTGCTG TTGCTGTTGA CAAAACTGGT GTCGAATTTT 
AGAACTCCCG CTCTTACCCC GTTCTCATTA TTGGATCTCG CTGTTTCCGT TCGTTCTCTG 
CTTCGATTCA ATCAATGCTG ACACCAACAG TGCCTACAAA ATCCACGAGG CATGTATGGA 
AGCCGGCTTG AACATTGCCG TTGCCGGAAT TCCTAAAACC ATCGACAACG ACATTGATTA 
CATCGATCGC AGCTTTGGGT TCGTGAGCGC TGTCGAAGCG GCGCAGGCGT CGATCCGCTC 
GGCCAAGACC GAGGCTATGT GCACCGTACC CAACGCGGTT GGCATCATCA AGCTCATGGG 
GCGGTCGGCG GGCTACCTGG CCACCTTTGC GGCTTTGGGG TCCGGCGACG TGGATTTGGT 
GCTGGTACCG GAAGTGCCCA TCGTACTGGA CGGACCGGGC GGTGTGTTGC CGTTTTTGCG 
GCAGCGTGTG AAAGAGCAAA AGTTTGCCGT GGTGGTGGTG GCGGAAGGAG CCGGCGAAGA 
GCTACTGGAA GCCACGAATG TGGTGGACAG GGGAGGGAAC CGGCTGTTGC CTCCGATCGG 
AGAATACATG CGGGACCGAA TTAAGGAGTA CTTTGTGGAG CACGGCGAAG AGGCCACAAT 
GAAGTATATT GACCCGTCGT ACACGGTACG GTCGGTACCC GCGAACGGCG CGGACTCGCT 
GTATTGTATG GAGCTTGCGC AGAACGCGGT ACACGGAGCC ATGGCGGGGT ACACGGGCTT 
TTCTGTGGGG TTGGTGAACA ACAACGTGGT GTATTTGCCC ATCCCCCAGC TGGTGGCGTC 
CAGTCCTCGT CAAATGAGTC CCTGTGGTAC TACGTGGGAA CGCGTTCTGG CTATGACGGG 
GCAACCGAAC ACGACGCCTT ACGTTCGTTC CGAAGAGCAG CCCATTCCCC TATAGAAAAG 
GACGACTGAT TTTGCTCAAC GCTAAATTAA TAACACGTGA AGCCTCCCAA GTT 

 

Protein sequence

MNERRNRASW LVLAVTGGPL LLSVSSRCFV DAFSIASSVS SRSSAHIGDS SSVRFLFADE 
CSLNTFDAEE CIATAGYVRD PTEASSVDNV LVAEIETLRD KFTSFENVDA HVKTTNMIKY 
CRRREGKRLL ASDTIAPSVN SRIANIEYNH LIEDRELVLV DTVRVPGMDK SSRAFHRAGP 
RKLLHFDPSL VNAAIVTCGG LCPGLNNVIR ELVHSLHNLY GAQNVWGITG GYHGFHNPEY 
APVLLTNEMV ENIHHEGGTI LRTSRGGFEI DAIVSFLRSK SISQLYIIGG DGTHRGAYKI 
HEACMEAGLN IAVAGIPKTI DNDIDYIDRS FGFVSAVEAA QASIRSAKTE AMCTVPNAVG 
IIKLMGRSAG YLATFAALGS GDVDLVLVPE VPIVLDGPGG VLPFLRQRVK EQKFAVVVVA 
EGAGEELLEA TNVVDRGGNR LLPPIGEYMR DRIKEYFVEH GEEATMKYID PSYTVRSVPA 
NGADSLYCME LAQNAVHGAM AGYTGFSVGL VNNNVVYLPI PQLVASSPRQ MSPCGTTWER 
VLAMTGQPNT TPYVRSEEQP IPL