Gene PHATRDRAFT_50414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50414 
Symbol 
ID7199169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp299700 
End bp300552 
Gene Length853 bp 
Protein Length262 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185358 
Protein GI219130408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0185184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAGAATGA AAACGTCCAG CCTCATTCAA GGGCGCAACG ACAGTTGCTA TTGAAAAGGC 
TGCCATGGAA GCTGCTGCTA TACCTCACTG GCTTCAGGAC CAATGCCGAA GACTCGAGGC
CAAAGATGAA TACGTTTCCA ATCTAAATCT GAACATACGG CGACTCGACG ATTCGATGAT
GGTTGTGCTT TCACAAGCTC TCCGCAAAAA CTCGGTTATT TCAGTGCTTA ATATGACTAG
TTCTCTCAAG AACAGCCCAC TCGGTTTAAA CATACTGGCG GAGCTCATTC TGCGATCTCA
CGCTTCGTTG GCTACACTTC ATTTGAGCTA CAATCACTTG ACGGACGTGG TTGCAGTAGG
TAACGCGCTA GTTACCAATC AAAAGCTAAT TTCGCTGCAT TTGGACTATA ATCTCATTGA
TAAGCGCAGT GCCGCCGCTA TGGCCGACGC TTTGCGAGTA AATACAACCC TAGTAAGGTT
GCATCTCAAC TACAATCTAC TGGGCGACGA AGGCGTCTTG GCACTTGCCG ACGGTTTGCA
GCACAATACG TCGCTACTGC ATTTGGGTTT GAAGCGAAAC AGTATATCGG CGGTAGGTGC
TTCCGTGCTG TTTCAGACTA TTGTCACAAG AAACATGAGT CTACAACGTC TTGACTTGGA
AGACAACTTT ATCCCTGCGG AAATGATCTC TCAAATTGGA ATCCTTTGTC GTGCGAACAA
AGCGGGGCGT CGGTATCTTA CCGACACGAA CTTTCCAGAC AACCTCTGGC CCGCTTTGCT
CGAGTGGGTC AACGACGATC CAGACGTTCT CTATTTCTTT GCTCGAGCAA AGCCTGGTTT
GTATGAGAGA TAG
 
Protein sequence
MEAAAIPHWL QDQCRRLEAK DEYVSNLNLN IRRLDDSMMV VLSQALRKNS VISVLNMTSS 
LKNSPLGLNI LAELILRSHA SLATLHLSYN HLTDVVAVGN ALVTNQKLIS LHLDYNLIDK
RSAAAMADAL RVNTTLVRLH LNYNLLGDEG VLALADGLQH NTSLLHLGLK RNSISAVGAS
VLFQTIVTRN MSLQRLDLED NFIPAEMISQ IGILCRANKA GRRYLTDTNF PDNLWPALLE
WVNDDPDVLY FFARAKPGLY ER