Gene PHATRDRAFT_50413 details

Gene Information

• Locus tag: PHATRDRAFT_50413
• ID: 7199220
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: +
• Start bp: 295377
• End bp: 297696
• Gene Length: 2320 bp
• Protein Length: 555 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002185304
• Protein GI: 219130296

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCGTCCCCG GCCCCTCACG GTCAATGCCT TTTACGCTTA AAAGGGTAAG GCCCAAGGCA 
AGACGCAACT CCTACCTCGC TAGTTGTTAA AACGTCGAAT GCGTGGTGGT GGTGTACCGA 
CAATCCCTTG CTAAAGGTTT CGTTCGTTGC TCGAAGCTAC CGGATCGCCA TCCTCTTGGT 
TGCGTCGACT CCGAGCCACC AATTCTCAGC ACACAGTCTC TCCGACTCTT ATCCAACACA 
CACCTCTGGT GTGGGTGTTG GTGTGTGTTT CTGTGGCTGT ACCTACGAAC GTATTGAATT 
ATATATAGTC CGTGCGCTCG CTACCGACAA TCACAATGAC CACAATGACG ACTCAGTCCA 
GTGGGATGGG AGTGAGGATA TCACCCTTGT CTCTTTTGAC GCATCTGCTC GTGGGTCTCG 
CCGGTCTCCA ACTGGGTCTC GTCATTGGGG GATACACGGT GATCCACACG GGCAGCGACG 
CTGCAACTAC CGTCACCACT AGTGGTGATA GTAGTAGTAG TAGTAGTAGT ACTGGTGCCA 
ACGCCGACGC CGTTGTTGGT ATCCCGTGTG TGCGAGACAC CACCGACGCT ACGATTCGCG 
AATTACGCCT GAAACTAGCG CACGCCCTCG CGGAGGCTTC CGCCGAAACT ACCCTGCCCG 
AGACTCTTCA GGGGTTCGTG GCCGGGATGG GACGCGTCGA TCGCGACGAA TTTATCCAGC 
GATTCGATGT CGGTGTGCCG TGGGATGCCA AGCAACCCGG CAATAAGGAA GTTCTCCTGC 
TGTACAATCA CCCATTGTCC CTGCCCCGTA ATGGAAGCAG CGACGCATCG TCCAACACCA 
TTCCTCGCTA CGAATCGATC AACGACGCCG TCCAGAACTG TCACCAAATG AAAATAGTGC 
TACAGAAACC GAATCAACCC AACGTCTGTT GGGCCGTCGT GGGACAGTGG GATTCGCACC 
ACGTCCAGAA ACTCATGCGA CTGCCGCCAG AACATAGTTT GTCGACCAAA AAGGCTGTCT 
CCGAGGGATT CCCGCTCCGC TACGTCTCTC GCAACCATTT GCCCAACGGT CGCCAGACGA 
GAGTTCCCAC CGGTACTTCC TACTTCCCCA TCCTACACGA CTATCTCGGC AAACTGGAAG 
CCACGCTCGC CCGCCTCAGT CCCGTCGCCG CGCAAGCGGC GGACCCCCAC AACTCTCTCG 
TCGTGCTCGT TTGCAACCAC GGACAATCGG AACTCTTGTG GAATTTCGTT TGTGCCGCGC 
GATCACGGTC GCTAAATCTC GCGCACGTCC TCGTCTTTGC GACCGACTCG GTGACGTACG 
ATCTCGCGGT CGCCATGGGT CTGCACGCAA TGGACGTCCA GAACGCCTTT GGTGACATGC 
CCACGGTTGC GGCCAGGCGC TACGGTGACG CCGCCTTTAC CGGAATGATG ATGAGCAAGG 
TCTACGTCAT GCATCTACTC ATCACTCTAG GATACAATGT GCTCTTCCAA GATGTCGACG 
TGGTGTGGTA CCAGGATCCC CTCGCGTATT TCAATAACGA CCAGTCCGAT TTTGATTTGT 
TCTTTCAAGA CGATGGAGCG CATTGTAAGT GTCGCGCATC CTGTATTTTT GTGGATGGTT 
GTGCGGAGGG TTGTTGTCGA ACGGCAAGCA CTATGACTTT CACGAGGGCG AAGCGCTCCG 
GTGGTCGTTG AATACGGTCT TCCTGTCCGG TTTGGTGTAT TCGAATTTTT GTAGGCCCTC 
CACCGTGTGG TCGAACCTTA GCGTTGCTAA CCTTTTCTTT CACACCTATT TTGTTAGCTC 
CACGGTATGC TCCGTACAGT CCAAATACGG GCTTATACTA TGTCCGCCAC AACGAGCGTA 
CGGAGTTTTT CTTTTCCACG TTGGCCCGCA TGGGTGATTT GATTCAAGCT TCGGGTTCGC 
ACCAATCCGC TCTCAACGCG CTTTTAGCCG AACACGCATC CTGGCGCGGA CTCAAGGTTA 
AAGTCTTTGG GACCAGCACG GACCAGGGTG AACTTTTTCC CGGTGGGTAC CATTTTCACC 
GACGCAAAGG CTTCATGAAA GAAATGTTAG TTACCAAAAG TGTACACCCG TACGTCTTTC 
ACATGTCATG GACGATGAAT AGTATCAACA AACAGCGATT CTTTCGACAG ATGGGAGACT 
GGTTCGTCCA AGAAGCTTGC ATTGGCAAAA CTCTGGACGA TATTGGGACG GACGATTCGC 
CGGACGTTGT ATCTAAATGC TGTGCTGCCG AGGCGCTTGT ATCCTGCCAC TATAGCGACA 
AGCCGAGTAT TATACCGTGC AAGGACAGTC CTTCGATTGA 

 

Protein sequence

MTTMTTQSSG MGVRISPLSL LTHLLVGLAG LQLGLVIGGY TVIHTGSDAA TTVTTSGDSS 
SSSSSTGANA DAVVGIPCVR DTTDATIREL RLKLAHALAE ASAETTLPET LQGFVAGMGR 
VDRDEFIQRF DVGVPWDAKQ PGNKEVLLLY NHPLSLPRNG SSDASSNTIP RYESINDAVQ 
NCHQMKIVLQ KPNQPNVCWA VVGQWDSHHV QKLMRLPPEH SLSTKKAVSE GFPLRYVSRN 
HLPNGRQTRV PTGTSYFPIL HDYLGKLEAT LARLSPVAAQ AADPHNSLVV LVCNHGQSEL 
LWNFVCAARS RSLNLAHVLV FATDSVTYDL AVAMGLHAMD VQNAFGDMPT VAARRYGDAA 
FTGMMMSKVY VMHLLITLGY NVLFQDVDVV WYQDPLAYFN NDQSDFDLFF QDDGAHSPRY 
APYSPNTGLY YVRHNERTEF FFSTLARMGD LIQASGSHQS ALNALLAEHA SWRGLKVKVF 
GTSTDQGELF PGGYHFHRRK GFMKEIINKQ RFFRQMGDWF VQEACIGKTL DDIGTDDSPD 
VRQAEYYTVQ GQSFD