| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50398 |
|---|
| Symbol | |
|---|
| ID | 7199159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | - |
|---|
| Start bp | 234685 |
|---|
| End bp | 235850 |
|---|
| Gene Length | 1166 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185344 |
|---|
| Protein GI | 219130379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TAGATTGGAT CGTTGCGTTG TCCCCCCAAA AGCCTATTCT CACCAGCGAA TACACGACCA
GTGTTACACC GACAACACTC ATAATCACTC ACACAATCCT TCTCCAACAA CAATCACGTC
CACGATCCTT GACTTTCCCG TTTCGCCATG ACACTCGTCA GTGCCGTTCC GATTCTCTCC
GTGTCCGGCC AATTCCACTC CCGTTTACAG TTGGAGCTGG TGGATTTGAC GTTGACCTCA
ACGTCGCACG GTCCTTTCAC GTCCGAAACC GACGACGCTT CGACGTCTTC TACCTTGACG
GTCGATCGCG TCGGATCGCA CAAGTCGTTG CTCCCGTCGT CATCGTCTTC CGGCAAGCAG
GTGCGCTTCG CCCTCCAACA CAACGACGCT AGAGACAACG TCCTCTACCC GCGCGAAGAC
TGCGGCGCCG CTTGGTACAC TGCCGCGGAC TACCGACACT TCAAGGCCTC CACATTGCAA
CTCGCCAAGG AAATCGCTCG AGCGGAAGCG GACCACGCCA CACCCTTTTC CTACCACGGC
GTCCTCCTGC GCGCGTACGA AGTCTGTGTG CACGGTCCCG ATCCGAAAGA CAACCCGGTG
CATCCTTCCC AGATGACGAC GCCACCGCCG ATCTTGACTC TGTACGAACG ACAGCACCTG
ACCAGATGGG CGAAAAGGAC TCCCGCGCGA GTGGGATTGG AACGTTGGAG CTGTCGACCC
ATTCATCGGG ACAAGGCCTT TCGACGACAC CAAGTTGTGG ACGTTGTTCT GGATTCACAG
GAATTGCTAC GTTGCCGGCC AGACAACGAC AATAATACTT CCATCACCCA CGATGCCGAC
GAACGTCTGC GTCAATTGAG TCTCGGTATT ACCCGACCAT CCGGATTGTT TGCCCAGTGC
CTCGCGCAAG CCCAAGCCAG TGCCGGGGAC GAGGGATGAG CAATGAGTCG AGCAGCCCAA
CACTACCTCT TCCGATCCAC GCCTTTCGCG TCACCAAAAC CCGTTTAGAA TCCGGGCAAT
CCGATTGCCG ACCCCCTACA ACTGTACACA TACACACGAC CTATATACAC GCTACCAACG
GATCTCTCCA TTGCACCCGA ATACTCCTCA AACAACTGAC TGTACATACC ATAACACAAG
AGTATTTTAT AAAAAGGGCA TTTCCG
|
|---|
| Protein sequence | MTLVSAVPIL SVSGQFHSRL QLELVDLTLT STSHGPFTSE TDDASTSSTL TVDRVGSHKS
LLPSSSSSGK QVRFALQHND ARDNVLYPRE DCGAAWYTAA DYRHFKASTL QLAKEIARAE
ADHATPFSYH GVLLRAYEVC VHGPDPKDNP VHPSQMTTPP PILTLYERQH LTRWAKRTPA
RVGLERWSCR PIHRDKAFRR HQVVDVVLDS QELLRCRPDN DNNTSITHDA DERLRQLSLG
ITRPSGLFAQ CLAQAQASAG DEG
|
|---|
| |