Gene PHATRDRAFT_50357 details

Gene Information

• Locus tag: PHATRDRAFT_50357
• ID: 7199182
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: -
• Start bp: 71243
• End bp: 74059
• Gene Length: 2817 bp
• Protein Length: 789 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002185320
• Protein GI: 219130329

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTCATC AAAATACATC CATGGCACGA AGAGTACTAA CAACACTTCT GGTATTTTCA 
GGGGCGATTC ATGTCTCGTC ACAGTTTAAC TCGGCTGTTC AGTGTCCCCA ATCTCCGGAT 
GTTACGGGCT ACGTATCAAT TGAAGCTTTG AATAATGATA TGGAGGCCGA GAGAGATAGA 
ATTCAGTCCG AAGGAGTTGA ATCCGCGCTC TCATCCTATA CATTTACACT ATGTCCAAAT 
CAAGTATTCG ATGCGGCAAA TGAGACGCTA ACTCCAGTGC TCAGTGGAGC GCAATTCGTC 
TGTGGAGCAA CTGGTTCATC TCAAGACAGT TGCTCCATCT CAAACGGACA AAATCAAGTC 
CTGATCGAAG ACTCAACAGT TGCAGGCTAT CCCATCGAAA CCGTTGGATT TGCTGGTGTA 
ACTTTTTCAC AGTTTGGAAC GTCTGCCATT GCGGGAGGCG CTGACTCGAC TACGACAGTG 
ATTCTTAATG ACCCTACTTT CTTGGTAGGT ACCCTTAACG CAACACGACT GATTTTTGTT 
CTGCTCTACT CACGTCCTTC TTTTTCGTCC AGATGAGCGG AAGCAGTTTC GCTACGCTTC 
AGCAAAATGG CGACCAGAAC AACCCGTTTT CACTAGAAGT TACTCGTGGG GCTGTGCGAA 
ACCTAGAAGT TGGCTCACCG CCAAGCGGCT CGATATTTGC AAATGAAGGA GGGGAACTCG 
CAATCAACGG CCTCGATGTC GTAAATCTTG ATGCTGCTTC CATCGTATCA TCATCCAACG 
GGGCAGCATC AATAATTCGT AGCGTCACCG TCTCTAGCAG TGACATCGAG GTACGATTCT 
CCATTTGCAT GGCTCTCCAT TTATTACCGA CAAAATCTTA CTCACCGTTT TCAATACCCT 
GTGCAGACTT TGTTTTCTAC TACCAACCGC GCTCAAACGA CTGCTGCTGT AATTGACGTG 
CAAAGAATGG GCAGTATGTC AGCGATTTTC GACTCAATGA TGGCGTCGGT GGCGATTTCT 
GGACTTAACG TTGTCAACAA CCAAATGCCG GAGCTGTGGA CTGGTGTTGC TTCGAGAGGT 
CTTTCTGATG TTTCCGTCAC CAACTCTACC TTTCGCGACA ACGCGGGGTC AGAGCATTTG 
TTTCTCGCCT CAACCGGTTC TCAAATAAAC GTGGATTCGA TCGAAGTCGC TGATTCGTTG 
GGTTCACTCA ATATTGTAAG AGACTTGAAA AATCTTCATC GACAGTGAGC AGGACACCAG 
CTTCTTACCC AGTTTGGATT TTCTAACAGA ATCGAGATAG ACCTAGCACC GTTCTAATCG 
CCATAAATTC AGCCGCTACA GCTTCTCGCG TGCAGGTATC AGGGGTGGGC ACAATGTCAG 
TAAGTACACG TGTTTGCCAC TTTTTAGGAT GTGCTGAGTC TTTGCGGTCT TATACATTTA 
ATGGCATCCC TTTTCTCTAT AGTCGGTTTT TTTTGTTTTC AATGAAAGCG ATGTGGGTAT 
GAGTCGAAAT TGTATTGTAG ACAGTGAAGT GGATGCGGCA GTCTTCGTCA GCGGGACTTC 
CAGCTCTACT TCGTCTCTGA ACTACATTAA TTCAACTCAA ACGCAAGTTT GTCAAGCGCC 
TGGCGAGCGC CTCGTTTTGG AGAATACTGG AGAGGCAAAC TGTTTCATTA CTGCCTTGTG 
TAACACGCGG TGCGGAGTTT GGGCCGACCA AGTCAGCTGT CGGGCGGATG AGCAAGTGAC 
TTCAGCTCCA ACACCTTTTA CGACGACCGC ACCGACCCTC GTCGAGAGCA CGGTACCAAT 
GGAAGTCGCT TCCGACACAC CTTCAAGTGT GCCAACAATG TCTATAGGAC CTTCTGCTAG 
GCCGCTTGTC TCTGATGTTC CAACGTCATC TGCTGTGACC AGTTTTCCGA CAGAAATCGC 
ATCCAATACC CCCACTATAA TGCCTACAAC CTCATCGGCG CCTACACTGG AAGGGTCCGA 
GCCGCCTTCT CAGCTCCCCA CCATAGAAGT GATGCAAAGT CCGACTTCGT CTCCAACTGA 
AGCCCCACCA TTTGACGGTG AGACATCTGC ACCAACGTTT ACGCCTTCTA CTGAGAGCCC 
AACATTTGAA GGGGAGACAT CCACACCCAC GTTCACGCAA TCAACACGTT TCCCAACGAA 
TAGCTCACCT CCTTCCGGGG TCACTTTGCA GCCTTCCTCA GCACAAAGCA TCGTCGCTTC 
ATCGTCTGCG CCCCCATCTT CCCTAGGTTC GGTCAGCTTC GCTCCATCGT TTCGACCGAC 
AGAAAAGACA AGCGAGTTTC CAAGTTCCAA GCCATCCTGC AGTACCGCGC CGCCTATTCT 
AGGAATCGGA AAGGGGAAAG GCAGTTCAAA AAGCTCAAAA AAATCGAAGA AGAGTGCCAA 
AGGCAAGGGA AAGGGCAGTG GAAAGGGCAA AGATTCGTCG TCCAAACAAG GTAAGGCCAA 
ACTTGAGCAC TTCTATTTAT AAAGTGGCAC AATGCATTTT CTAAACTTAC TGTCAAAAAT 
TTGCTTCCAG ACGATCCGCA ATTTGACCCT TTCTGCCAGC CCTCACATAG TCCGACCCTA 
AGCCTTCCAC CAACGGGAAA AGGATCGAGC AGAAGCAGCA ATAGTGGCAA AGGTGGTAAG 
AGCGGAAAGG GCAGCGCGGG TAACAAGAAT GGTAGTGACA GCAAAATGAA AATGAATAGA 
AGAAAACTTG AGGACAACGT CACAGTCAGT GACTCCAGAA ATGATTTCAT AGAAGTCACA 
GAAGAAATGG AATACAATGG GACCACAGAA CTGACAGTGA AACGCTATTT ACGGTAA 

 

Protein sequence

MCHQNTSMAR RVLTTLLVFS GAIHVSSQFN SAVQCPQSPD VTGYVSIEAL NNDMEAERDR 
IQSEGVESAL SSYTFTLCPN QVFDAANETL TPVLSGAQFV CGATGSSQDS CSISNGQNQV 
LIEDSTVAGY PIETVGFAGV TFSQFGTSAI AGGADSTTTV ILNDPTFLMS GSSFATLQQN 
GDQNNPFSLE VTRGAVRNLE VGSPPSGSIF ANEGGELAIN GLDVVNLDAA SIVSSSNGAA 
SIIRSVTVSS SDIETLFSTT NRAQTTAAVI DVQRMGSMSA IFDSMMASVA ISGLNVVNNQ 
MPELWTGVAS RGLSDVSVTN STFRDNAGSE HLFLASTGSQ INVDSIEVAD SLGSLNIVSG 
VGTMSSVFFV FNESDVGMSR NCIVDSEVDA AVFVSGTSSS TSSLNYINST QTQVCQAPGE 
RLVLENTGEA NCFITALCNT RCGVWADQVS CRADEQVTSA PTPFTTTAPT LVESTVPMEV 
ASDTPSSVPT MSIGPSARPL VSDVPTSSAV TSFPTEIASN TPTIMPTTSS APTLEGSEPP 
SQLPTIEVMQ SPTSSPTEAP PFDGETSAPT FTPSTESPTF EGETSTPTFT QSTRFPTNSS 
PPSGVTLQPS SAQSIVASSS APPSSLGSVS FAPSFRPTEK TSEFPSSKPS CSTAPPILGI 
GKGKGSSKSS KKSKKSAKGK GKGSGKGKDS SSKQDDPQFD PFCQPSHSPT LSLPPTGKGS 
SRSSNSGKGG KSGKGSAGNK NGSDSKMKMN RRKLEDNVTV SDSRNDFIEV TEEMEYNGTT 
ELTVKRYLR