| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50348 |
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| Symbol | |
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| ID | 7199176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | - |
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| Start bp | 8298 |
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| End bp | 10351 |
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| Gene Length | 2054 bp |
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| Protein Length | 317 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185314 |
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| Protein GI | 219130317 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00515891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTT CTCGATCTGA CAGTCGTAGC TTTTCACCAA GATCTGGATG GTTCGCTCTG
CCAAACCGGT ATAGTGCGTT GTTTCCGTGG GCCCTCTTTC TGATAGGTTG CTTTATCGGC
CATCTACACG GGAACTTCAT AGCTCGTAGT GAAAATAGCC AAATCATCAA CGAGTGTCTC
CGACATGACA ACCCTCTCTG TGTCACTTCG CACGTCCATA CCGATGGCGG AGTCGATCGC
ATTGGCGACG GCTGGCACTC GATTGACGTG TTTTACGGCC ATACAGACTT GCTTAAGAAG
ACACTACCGT CCAACCGCAC GTGGTTTTCG CAAGCTTCGC AAGATGAACT CGTAGCAAGC
TTATTCAAAG GCAAACGCGA TGGTTATTTT ATTGATCTTG CTGCCAATGA TGCGACCGAC
TTGTCAAACA CCTACGCTTT GGAACAAGAG TACGGTTGGA CCGGATTGTG CGTCGAGCCC
AATCCAATGT ATTGGCACAA TTTGAGCTAC AGGGATTGCC AGATTGTCGG TGCTGTAGTT
GGACAAGCTC GTCTGGAACA AGTGCATTTT CGGTTTGAAG CAGGGGACCA TGGTGGTATT
GCAGGCGATG GCTTCGACAA TGGAAAAAGA TGGCAACGAT ACAGCGAACT CAAATACACC
GTCACTCTAC TAGAAATATT GGAGCGCTAC AATGCTCCCA CCCAAATTGA TTATCTTTCG
TTGGACGTGG AAGGCGCAGA GTCTTTCATT ATGATGAATT TCCCTCTCGA CAAATATCAG
ATCAAGGTAA TTACAGCAGA GAGGCTTCGA GGACCAATCA GAGAGTTTTT GAAAGGCCAC
GGATATGTGT TTGTAAAAAA GCTTACAAGA TGGGGCGAAT CCTTGTGGAT CCACAACAGT
GCCAAGGACG AACTTGATCT CCAATTGATA CAACAGTTCA ACTTCCCAAT ATAAAAAGCC
GTAGAGGACT GGCCAACGAA GCGGCAATCT CAATATTCTG CTATCCAAAC CTTCACTTCT
GTTTGTTAGA TTTCTTTTGA ATGTTCCCAC TGGCTGCAAA AGCAGAAAAG GACATGTAAC
TCAGAACGGA AGCAATCGTC GAGCCGCCAG TAATCCAGCA TAGGGCGGTG AGCGTTTCAT
CCAATCCAGC ATGGAGCGGA AGAGTAATGC CCACGCCAAG AGTAATGAAT TGAAACATTG
TGCTAACTTT ACCTGTAAAA GTTGGTTGCA CTTTTAAAGG TGTTCTTGTG GGATCAACAA
CTGCTATACC TTTCTGTGTT TGTTTTGCAA CGTAAAAGTA GGTTGCCGAC ATCAGAACGA
GGTCTTTCGC TAGCCATAAT ACCACAAGAG GCGTTGGAAG CGTACCGTTG CACCACAGGG
AGACCGAGAG CGCGTTAATC AGAAGCTTGT CCGCAAATGG GTCTAAGTAG GTTCCGAGCA
CAGTTGCCAT GTTGTGGTGC TTAGCTAGGT AACCGTCCAG TCCGTCCGAC AGTCCAGCTA
AGAAACACCC TGCTAAAGCA GCCTCGTGTT GATTTGTAAT AATCCAGTAC GAAAGGAGCG
GCGTGCATGC AATTCGAGAA AGTGTAATGA CGTTAGGTGG GGATTGTAAC TGCCGAAACC
AATTTCCCGT TGCATTTGTT TTCCAGGCGT TGTCTTCGTC TGTGCTGTTC GTGCCAAAGC
ATAGCTTTTG CTTCTCGGAA AAAATATCAT TCACTGTAAC TCTGATTCGC CGACACCGTG
AATCAACTGT AAAGCGAGAT TTCTCGTTGC CACGAACTGC CCCACACGGC GCAAAGGAGA
CTCTCCTTTC TGCTCTGTAG CGCAGTCTCT GTTGGACACG AAGCATTCTC CACATATTTT
AATTGATGTT AGCAAACACA GTCAACGGGG CTCAAACGAA AGCGGTGATG GCACGAGGAG
CAAATACAGA AGTTGCAATA AGCTTTTTTC ATTCATTCGT CTACAATGTA AAGCTTTTGC
CCTTGGTTTG TCCGTGACAG TGTAGAGCAA ACGCACTGCA CAACCATGCG TCTCATCTCG
AACTAGCAGG AGTC
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| Protein sequence | MKVSRSDSRS FSPRSGWFAL PNRYSALFPW ALFLIGCFIG HLHGNFIARS ENSQIINECL
RHDNPLCVTS HVHTDGGVDR IGDGWHSIDV FYGHTDLLKK TLPSNRTWFS QASQDELVAS
LFKGKRDGYF IDLAANDATD LSNTYALEQE YGWTGLCVEP NPMYWHNLSY RDCQIVGAVV
GQARLEQVHF RFEAGDHGGI AGDGFDNGKR WQRYSELKYT VTLLEILERY NAPTQIDYLS
LDVEGAESFI MMNFPLDKYQ IKVITAERLR GPIREFLKGH GYVFVKKLTR WGESLWIHNS
AKDELDLQLI QQFNFPI
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