| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41383 |
|---|
| Symbol | |
|---|
| ID | 7199174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | + |
|---|
| Start bp | 324127 |
|---|
| End bp | 325911 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185310 |
|---|
| Protein GI | 219130309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCTA CCAGGAATGA CAAGACGGCG GGAAGGCATG CCAATGCCTA CCGACGAGCG
ACGCCCTATC GGACCCTTGC TTTGTGTGCC ACGTTTGGAG TTGTTTGCTT TTATCTGGGT
GTCTTGCTGG GTAGTGTAAC TTTCGCATCA CACTCTTCTT GTTCGTCGGC GGAAGAGCTC
AACACACGAG TAGAAGAGCG AGTGAACGAA ATATCTTCCG CCTGGAAGTA CAAACACAAG
CTGGAGCAGG AAGATACCGC CGCACGGATA CCTGCCAATC TACACGATAT AGTTCAAGGC
ATGACCCGCG TGGATCGCAA CGAGTTTGCG GCTCTGTTTC CCATGGGGGT ACCGTTGGAT
CCGTCGTCGC CACAGAACGA TCAAGTCGTC ATTCTGCACA ACTCGCCGCG ATCGTTGCCC
ACGGATCCGT TTGCGGCCGC CGAAGCCTCC TCACAAACCA CCATACCTTT ACTCAGCGCT
GCCGATGCTA CCGAAAATTG TGATAATCTA CACGTGGTGC TCACGGACCA CAATTTGAAG
CGTCGTCAAT GCGTGGCCCT TATGGGTCAA TACGAAGCGT TCCATTTGCA AAAGTTTATG
CGGTTGCCAC AGTCGGGCAA GCTCGACCCA CACCTGCCAC TGCGGCTCGT CAATCGAGGA
GCCCATCAAT CGGGACGGAA GTCAACCAAA ACGCCAACCA TGGAACAGAC AATGCAAGCG
TGGTCGACCT TGACGCCGTA CTTGCAGAAT ATAACCCAGA CGTTGGACAA ATTGAGACCG
ATCGCGGCGT CCGTGGCCGT CGATAACACG ATTGTCGTCA TGGTCTGTAA TCACGGACAG
TCGGAGTTGC TGCTAAACTT CGCCTGTGCC GCCCGAGCGC GGGGGCTCGA CACGGCTTTA
GAGGCCGTCT TGGTGTTCGC CACGGACGAG GAAACTCGGG ATTTGGCGAT CGGATTGGGC
TTGTCGGTTT TCTATGATCC AGTTGTGTTT GGCGAAATGC CCAAGGAAGC TGCGAGGGCA
TATGCAGACG TCAAGTTTCG GGCCATGATG ATGGCCAAGG TATACTGTGT ACAGCTAGTC
AGCATGTTGG GGTATGATTT ATTGTTTCAA GACGTAGACA TAGTATGGTT GCGCAATCCG
CTCGAATACT TTCACAACGA CACATCCAGT GCGAACGACG AGGTCAGCCC AGACTATTAC
GACGTTTATT TTCAGGATGA TGGGAACCAC GCGATATACT ACGCGCCGTA TTCAGCCAAT
ACGGGCTTTT ACTTTGTCCG CCACAACGAC AAGACTCGCT ATTTTTTCAA TTCGCTACTC
CTCGCGGGCG ATTTGATTTT GACGACTAAA TCCCACCAAA TCCCGCTCGT CGCTTTGCTG
CAGGAGCATG CCTCCATGTA CGGACTCAAG GTAAAAATAT TCTCGCGCCT TGAAAACGAC
TTTCCTGGTG GTCACGCCTA TCACCGACGC AAGGACTTTA TGAAGGATTA TTTTGCCGGA
CACGTTAACC CGTATTTGTT CCATATGAGT TGGACCAAGA GCAAAATCAA CAAAGGCAAG
TTCTTTGAGC AAATGGGGGA ATGGTATTTG AGGGACACTT GTGCGCAAAA AACGGCGCAA
CATATTCTTG ACCTGCCGGA TGGTACCAGC GTGAACCAAC AATCTTTAGT AGAACCGTGC
TGCATGGCCA CATCGGTCGT CAAATGTCAT TTTCGAGACA AGGCAAGCAA AATCCCGTGC
AACGACAGTC CAGCTATCGA CAGGAATGGC CGATCTTTTT GGTAA
|
|---|
| Protein sequence | MVATRNDKTA GRHANAYRRA TPYRTLALCA TFGVVCFYLG VLLGSVTFAS HSSCSSAEEL
NTRVEERVNE ISSAWKYKHK LEQEDTAARI PANLHDIVQG MTRVDRNEFA ALFPMGVPLD
PSSPQNDQVV ILHNSPRSLP TDPFAAAEAS SQTTIPLLSA ADATENCDNL HVVLTDHNLK
RRQCVALMGQ YEAFHLQKFM RLPQSGKLDP HLPLRLVNRG AHQSGRKSTK TPTMEQTMQA
WSTLTPYLQN ITQTLDKLRP IAASVAVDNT IVVMVCNHGQ SELLLNFACA ARARGLDTAL
EAVLVFATDE ETRDLAIGLG LSVFYDPVVF GEMPKEAARA YADVKFRAMM MAKVYCVQLV
SMLGYDLLFQ DVDIVWLRNP LEYFHNDTSS ANDEVSPDYY DVYFQDDGNH AIYYAPYSAN
TGFYFVRHND KTRYFFNSLL LAGDLILTTK SHQIPLVALL QEHASMYGLK VKIFSRLEND
FPGGHAYHRR KDFMKDYFAG HVNPYLFHMS WTKSKINKGK FFEQMGEWYL RDTCAQKTAQ
HILDLPDGTS VNQQSLVEPC CMATSVVKCH FRDKASKIPC NDSPAIDRNG RSFW
|
|---|
| |