Gene PHATRDRAFT_41365 details

Gene Information

• Locus tag: PHATRDRAFT_41365
• ID: 7199167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: -
• Start bp: 282682
• End bp: 284643
• Gene Length: 1962 bp
• Protein Length: 653 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185355
• Protein GI: 219130401

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATCTC TCTCGCAGCT TCTCCGGCGT ACCATCCGCG AAGGTGTACC GTTGTACAAC 
GACGGGCAAA CGCAGGAATG CTACGAAGTC TACCTCATGG CCGCCCAGCA CTCCCTCGAA 
TCGCCTCTGG TGGTACAAAG CCGCGCTGGG ATCAGTCTCA AGGACGCGTG TCGCCAGGCA 
GAAGCCAAGG CTACATCGCC TTATCTGAAC TTCTCAGAGG CAGCCTGGAT CTTGCGCCGC 
TGCTTTGACG AGATTTTGTC TTCGCAAGCG TCTCGTCAGC TCAACCTCGC ATCTTCGTCT 
ATAGCCAGCC ATGCAGATAG TTCCGACAAC GAAGTTGGCT ACTGGCAAGA TGAGCGGGTA 
CTGAACTCCA GCGATGCTGA GAAAGGACAG GCATTGGCCG ATATTGGCTT GATTCTTCAT 
ACTCGTCTCA AACCCGCTCC ACAGGAGCAG GTGGAAACGA CTGTCCCTTA TGTTGTTCCA 
GGGTCGGAAA TAGTCGAGAC TCTGACCTAC TTGGGCCTGG CAGGAAACAG CGCTTTGGCA 
ACTGAAAAAT GCAATCTTTT GGTGCGATCA GGTCTATTAG TCCCTGTCTC GTCCGAGGAC 
GCCACTCGTT TTCAGGACGG CACCCACTTG TATGCGTTTC CGGGTCGCAA CGAGCTGGAA 
GCCTCCCTTG AAAGGATTAT TGCTACCGAC CGCTCCGCAA TTGACGGTAC GGAAGAAAGT 
GTTCTGCGAA TTGCTCTGGA AACTTCTCTG AAAGGTACAA ATGTGGATGT GGAATTAAGA 
CCTGTCCGGG AACATGGACA TCGCTCGTCG GCTTTCGTGA TCGCAGAAGA CTTGGCCGGT 
GCCAAGATTT CCGATTCGCT GGAGGCTTTG CTGCCCCATT TGGTCATTGC CGATCGACGG 
TACAATCTCA AGAAATATGA GGCTTGCTTT TTAGGCAATC AAGCCGTAAC GGCTGTGTTG 
GATACAAAAT TGGCCGACTC GCGCAACGAA GCACTCGTGA TCCTAAATGA CATGCTTAAT 
GTTGGATTAA TCCATCACGT CACCCACGAC CATTTGGTGG AGGACAAGGT GTTATTTTAC 
CGCGTCACAT CGATTGGTGA TATTAAAACT GCGCTCGACA ATACTTGCGC TTTGCCTGAG 
GAACCTAAGA CCGGCTTCGA ACGGCTCCGT CACTCCGCGC TCTTGCGACG GTACAATCAG 
TTTGCCAGTC TCAATATTCC CGATATTTTG AACGCTTTTT ACGGATGCGA TAGCGAATCC 
GGCTGGGATG AGGTAGACTT GCAGAATTGG CGGACGAACA TGAAGCGCTG GGGCTTTGGG 
AGACGAGAAG ACCAGGATGA TGACATGGTC CATCGTTTGT CGCCGTTGCT GTTGAGTATT 
GATCCGGAAA CTTGGGACGT GACGGACGAT GAAGAGTGGG AATCCCCATT TGGTATTATA 
GCTCAAATCG CCATTTTCGA TCAAGTCTCA CGTTCCGCAT TCCGCGGGAC GGCCGACGCC 
TTCAAGTGGG ACAAAATCGC CATTCGTGCC ACGAAAGTAG CCATCGCCAA GGGATACTTT 
GAAACGGCCT ACAAGTCAAC CTTAAATCAG TTTCTTATTC TTTTACCTTT GGAGCATTCC 
GAATCGTGGG AAGACCAAAA GCTAGGCGTG CGCTTGCTCT TAAAGCTCCT CAGTACCGTC 
GCTGTTCAGG ATGAGGGCTT TTCCGATTAC GAAATTGTGA AACGCCTTGA ATTTTCCAAA 
CGTTTATCGA CGGCTTTCTT GGAGCACGCC CAGGTAGTGG TTAAATTCCG ACGGTATCCG 
CACCGCAACC GAGTCCACGG GCGGAGTACT ACGTTGGAAG AGCGAATATG GTTGGCCTCT 
GATCTGGTGC CGCGCTGGGC CAAGTCGCAG AATCCCGAAG ACGCCCACAA TCTAATAAAG 
TTGCCCATCA TTCCACTAAA GCGTCTCACG AAAGGACGTT GA 

 

Protein sequence

MESLSQLLRR TIREGVPLYN DGQTQECYEV YLMAAQHSLE SPLVVQSRAG ISLKDACRQA 
EAKATSPYLN FSEAAWILRR CFDEILSSQA SRQLNLASSS IASHADSSDN EVGYWQDERV 
LNSSDAEKGQ ALADIGLILH TRLKPAPQEQ VETTVPYVVP GSEIVETLTY LGLAGNSALA 
TEKCNLLVRS GLLVPVSSED ATRFQDGTHL YAFPGRNELE ASLERIIATD RSAIDGTEES 
VLRIALETSL KGTNVDVELR PVREHGHRSS AFVIAEDLAG AKISDSLEAL LPHLVIADRR 
YNLKKYEACF LGNQAVTAVL DTKLADSRNE ALVILNDMLN VGLIHHVTHD HLVEDKVLFY 
RVTSIGDIKT ALDNTCALPE EPKTGFERLR HSALLRRYNQ FASLNIPDIL NAFYGCDSES 
GWDEVDLQNW RTNMKRWGFG RREDQDDDMV HRLSPLLLSI DPETWDVTDD EEWESPFGII 
AQIAIFDQVS RSAFRGTADA FKWDKIAIRA TKVAIAKGYF ETAYKSTLNQ FLILLPLEHS 
ESWEDQKLGV RLLLKLLSTV AVQDEGFSDY EIVKRLEFSK RLSTAFLEHA QVVVKFRRYP 
HRNRVHGRST TLEERIWLAS DLVPRWAKSQ NPEDAHNLIK LPIIPLKRLT KGR