Gene PHATRDRAFT_41351 details

Gene Information

• Locus tag: PHATRDRAFT_41351
• ID: 7199161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011697
• Strand: -
• Start bp: 249747
• End bp: 251786
• Gene Length: 2040 bp
• Protein Length: 679 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002185347
• Protein GI: 219130385

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGCA CTTCTAATAC CGCAACGACT ACCGTCGCCT TGCCTCCCGC TCTGTCCTTG 
GAAAGCTTGT CTTGCTCGCA CAATGGCGGA GAAACCTGGC AGCTCCGGGA CGTTTCGTAC 
GTACTTCCCC GGGGTGCCAA GGTGGCACTC GTCGGACGCA ACGGGACGGG CAAGTCCACC 
TTGCTCCGCA TCTTAGCTTC CCGGGCGTGT GCGGACGCTG CTGACGAAGC ACAGAATATC 
AAATATACCG GACAAGTCGT GACGCCACGG GACGTCAAGG TTGCCTACGT CGAACAGGAG 
CCGCACCTGT CCATGGACTT GAACGTCGCC GACGCCCTCT TGGGGTTCCG TGGCGACGGC 
ACCGTCGAGA CCAGTAGTGC CAAAAATAAA TACGCAGCCG TCCGGAAATA CCGTCTAGCC 
GTCCAGGAAG CCGAAGTTAA GCCGGAAGCC TTTGCCCAGG CCTGCGCCGC CATGGATGCC 
TTGGAAGGAT GGAACGTCTG GACAAAAGCC GAAGAAGTCG CCACTAAGCT CCGCGTACGG 
CACCTACAAG ATCAGCCACT GGCCAAATTA TCCGGCGGGG AACGGAAGCG GGTCGCATTG 
GCCGCTGCGT TGGTCCAAGA ACCCGACGTA CTTTTGTTGG ATGAACCGAC AAATTTCTTG 
TCCCTCGCGG GGGTTCAGTG GCTGAGTGAT TTGCTGCTCG GTGACAAGAA GCTTACCATT 
CTCATGGTGA CGCACGACCG AGCCTTTCTG GACGAAGTGT GCGATCGAAT ACTGGAACTG 
GATCAAGGAT CCGTTTACGA ATACGTCGGA TCGTACGCCG ACTACTTGGA AGGAAAACAG 
GAACGGCTCG CCGTGGAAGA CGCCGCCTAC CAGTCCGCCA AGGCCAAGTA CGCGGTCGAG 
CTCGATTGGA TGCGCCGACA ACCACAGGCC CGTCAAACCA AGGCGAAAGC TCGCATCGAC 
GCATTTTACA AGCTGGAGCA AGCGACCAAA CCGAGACCCC GCGATCCCAC TCTCAATCTA 
GCCAGCGAAT CCCGACGTAT CGGTGGCAAA ATTATTTCCA TGAGAAACGT TTCGCTGAAA 
TTCGGAGACC GGACCATGCT GAAAGATTTT TCCTACGATT TTTGCAAAGG CGACCGGATT 
TGTCTGAGCG GCGGCAACGG CATTGGAAAA ACCACATTTT TACGCGTGTT GACAGGCGAG 
CAACCGGCCG ACGCTGGCGA TATTGACATT GGCGACACGA TCGTGCTCGG CGTATACGAA 
CAAAACGGCA TCGAAATCGA GGACCCCGAG CAGACCGTGC TCGAATTTGC CGTCGAGCAG 
GCCCGAGCCC GGGACGGAGC CAGCGCCGAC GAAGGTCCGG ACGACGCCCG AAGGTTGTTA 
CGGCAATTTG AATTCCCTCA AGCCCGTTGG GCCGAACGCA TTTCGGTCCT CTCTGGTGGA 
GAAAAGCGAC GGCTACAAAT GCTTTCAGTC TTTAGCCAAC GGCCAAATGT GCTGATTATG 
GACGAACCGT CGGTAGATTG TGACTTGGAT ACGTTGACGG CTCTCGAAAA GTATTTGCAA 
GAGTTTGATG GGGTGCTGCT GATCGTCAGT CACGACCGCG CATTCGCCGA CAAGGTCACG 
GATCACTTGT TTGTCTTTGA AGGACACGGG GAAATTAAGG ATTTTCAAGG AAGTCTTTCT 
GAATACGCGA CCACCTTGAT TGAATTAGAG AACGACCGTA TTGCGGAAGG GTCCCGCGGA 
CAGGCTGATA CGGAAGAGAA AAAGGGAGCC TACAAAGAAG ACAAGGCCAA ACGGAACGAG 
CAACGCAATC AAGTGCGCCG GGCAAAAAAG GATATGGTCA ATGTCGAAAA GGCGATTGAA 
AAACTAAAAG AAACCGCAGC CTCGTACGAG AAAGAAATCG ACGTTTGTAG CGGCGAAGGC 
TGGACCATTC TGGCCGATTT GACTGACAAA TTGAACAAGG TGAACGAGGA AATCGACGAG 
AAAGAAATGC GGTGGATGGA ATTGGGAGAG CTAGTGGAAG AGAGTGAGGT CGAAGCGTAA 

 

Protein sequence

MSSTSNTATT TVALPPALSL ESLSCSHNGG ETWQLRDVSY VLPRGAKVAL VGRNGTGKST 
LLRILASRAC ADAADEAQNI KYTGQVVTPR DVKVAYVEQE PHLSMDLNVA DALLGFRGDG 
TVETSSAKNK YAAVRKYRLA VQEAEVKPEA FAQACAAMDA LEGWNVWTKA EEVATKLRVR 
HLQDQPLAKL SGGERKRVAL AAALVQEPDV LLLDEPTNFL SLAGVQWLSD LLLGDKKLTI 
LMVTHDRAFL DEVCDRILEL DQGSVYEYVG SYADYLEGKQ ERLAVEDAAY QSAKAKYAVE 
LDWMRRQPQA RQTKAKARID AFYKLEQATK PRPRDPTLNL ASESRRIGGK IISMRNVSLK 
FGDRTMLKDF SYDFCKGDRI CLSGGNGIGK TTFLRVLTGE QPADAGDIDI GDTIVLGVYE 
QNGIEIEDPE QTVLEFAVEQ ARARDGASAD EGPDDARRLL RQFEFPQARW AERISVLSGG 
EKRRLQMLSV FSQRPNVLIM DEPSVDCDLD TLTALEKYLQ EFDGVLLIVS HDRAFADKVT 
DHLFVFEGHG EIKDFQGSLS EYATTLIELE NDRIAEGSRG QADTEEKKGA YKEDKAKRNE 
QRNQVRRAKK DMVNVEKAIE KLKETAASYE KEIDVCSGEG WTILADLTDK LNKVNEEIDE 
KEMRWMELGE LVEESEVEA