Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41327 |
Symbol | |
ID | 7199197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 164961 |
End bp | 165689 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185335 |
Protein GI | 219130360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0889051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTTGT GGTGGTGGTC CGTGTGGGCG GGAACCTTGG TCGTCGACGG GGCGCGTTGG ATCTTGACGT TGGACGCGTA CGACGAAGAA TGTTTCTTAC TCCGGACTCC CACCACACAT TCCTCACGTC GTCGGAATCC CCCGCAACCC GTACTCACGG GTGACTACGG ACTCATCGAC GACGTGTCGG CTGATCCGTT GCTTCTTTAC GTGACGCAAG GCAGTGACGA ACGCGTCGTC TACCAAACTC GGGGTCGACC CTCCGATACC TTTCGACTCC CAGTGCAACT CAAGGAACAA TACTGGCTGT GTATTCAGAA TTCGTCACAC GGACCGGAAG ACCACCACTT GGAAGAACCG GAACACGAAG ACGGACGAAC CCGACGCGTC GGATTGGCCT ACCGACTCGA ATACGATCAC AACCAACACG ACAATGATGA CGACGACGAC AATAATAATA ATCACCACCG ATTGCCACAA GAGGTTCAGT CGCACGCAGA CGAATGGCGC ACGCAGTCTG GGGACATTCA CGATCAGTTC CGCAATCTGC AATCGCATCA CGAGTATCTC AAGGTCCGCG AATCCAATCA CCGGGCCCTG GCTGAACATA ACTTTTCCGC CGTACTCATC TGGACGTTGG CCGAAGCCGG CGTCGTCCTC ACCGTGGCCT GCGCACAAAT ACTTTACCTG CGCAGATTTT TGGAACGACA AAATTCCCGA ATGTACTAA
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Protein sequence | MVLWWWSVWA GTLVVDGARW ILTLDAYDEE CFLLRTPTTH SSRRRNPPQP VLTGDYGLID DVSADPLLLY VTQGSDERVV YQTRGRPSDT FRLPVQLKEQ YWLCIQNSSH GPEDHHLEEP EHEDGRTRRV GLAYRLEYDH NQHDNDDDDD NNNNHHRLPQ EVQSHADEWR TQSGDIHDQF RNLQSHHEYL KVRESNHRAL AEHNFSAVLI WTLAEAGVVL TVACAQILYL RRFLERQNSR MY
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