Gene PHATRDRAFT_41327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41327 
Symbol 
ID7199197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp164961 
End bp165689 
Gene Length729 bp 
Protein Length242 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185335 
Protein GI219130360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0889051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTGT GGTGGTGGTC CGTGTGGGCG GGAACCTTGG TCGTCGACGG GGCGCGTTGG 
ATCTTGACGT TGGACGCGTA CGACGAAGAA TGTTTCTTAC TCCGGACTCC CACCACACAT
TCCTCACGTC GTCGGAATCC CCCGCAACCC GTACTCACGG GTGACTACGG ACTCATCGAC
GACGTGTCGG CTGATCCGTT GCTTCTTTAC GTGACGCAAG GCAGTGACGA ACGCGTCGTC
TACCAAACTC GGGGTCGACC CTCCGATACC TTTCGACTCC CAGTGCAACT CAAGGAACAA
TACTGGCTGT GTATTCAGAA TTCGTCACAC GGACCGGAAG ACCACCACTT GGAAGAACCG
GAACACGAAG ACGGACGAAC CCGACGCGTC GGATTGGCCT ACCGACTCGA ATACGATCAC
AACCAACACG ACAATGATGA CGACGACGAC AATAATAATA ATCACCACCG ATTGCCACAA
GAGGTTCAGT CGCACGCAGA CGAATGGCGC ACGCAGTCTG GGGACATTCA CGATCAGTTC
CGCAATCTGC AATCGCATCA CGAGTATCTC AAGGTCCGCG AATCCAATCA CCGGGCCCTG
GCTGAACATA ACTTTTCCGC CGTACTCATC TGGACGTTGG CCGAAGCCGG CGTCGTCCTC
ACCGTGGCCT GCGCACAAAT ACTTTACCTG CGCAGATTTT TGGAACGACA AAATTCCCGA
ATGTACTAA
 
Protein sequence
MVLWWWSVWA GTLVVDGARW ILTLDAYDEE CFLLRTPTTH SSRRRNPPQP VLTGDYGLID 
DVSADPLLLY VTQGSDERVV YQTRGRPSDT FRLPVQLKEQ YWLCIQNSSH GPEDHHLEEP
EHEDGRTRRV GLAYRLEYDH NQHDNDDDDD NNNNHHRLPQ EVQSHADEWR TQSGDIHDQF
RNLQSHHEYL KVRESNHRAL AEHNFSAVLI WTLAEAGVVL TVACAQILYL RRFLERQNSR
MY