| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41302 |
|---|
| Symbol | |
|---|
| ID | 7199142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011697 |
|---|
| Strand | - |
|---|
| Start bp | 68044 |
|---|
| End bp | 70507 |
|---|
| Gene Length | 2464 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185319 |
|---|
| Protein GI | 219130327 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTT TCCCAAAGGT TACTGTTACC ATAGTAACAT TTGTAATTGC GCTAGCCTGG
GGTTTCAATG ACGCCGTGGC TCAGACTGTA GCATGCCCTC AAGCAGAGGG TTTGACCGGC
TACACAACAA TTGCATCGAT CAACAATGAC ATGAGGGCCG AGTTAGCACG AATCAGTGAC
GGCGAAAAAC TTCCTGAAGA CAGTTACACC TATACGCTTT GTCCGCAGAC AATATTTGAT
GTCTCAAATG AGCCTTTGCA GCCGATTTTA AGTGATGTTT CTTTCGCGTG TGGCTCAAAC
GGGGAGGCGA ATGACAGTTG CGTTCTTTTC GGAGGTAGCC AGCAAGTCCT CATTGTAGAC
TCACTTTTGA ATTCATATCC TCTAGAACGA ATTACTTTCT CTGGGTTGAC ATTCTCTGGT
TTCAACCAGA ATTCTGAAAG TAGGGGTACT GCGATTGCTG CTTTTGCTTC GAAGCCCACT
TCTGCGATTT TCCGTGACGC TTTGTTTCGT GTACGTTTTT TCCGTTTTGA ATGCCAACTA
CAAATAAGAT GTCCAATCGC TTCTCACAAA TTCAAACACA AATCACAGGA CTTTATGAGC
GATTTCGTCA TACTTCAAAG TACAGGGGAG CCGGGGTCGG AGCCAATGAT GATCGAAATC
AATGACAGTA TCGTCAATGG CGGCACAACA GGAGTCTTCT TTGACAACGA CGGCGGCTTT
CTAAATATCA GAAATATTCA GGTTGAAGGA TTAAATGCTG CCTCTTTCAT TGCCACGGCC
AATGGAGGCG TTTCGCGGCT TAGGGAGTCC TCAATTTCCA AAGGATCTTT GGATTCGATA
ACATACACAA CTAACTCGGC GGAGCAGCAA GTTGCAGATG TGAACATTTT TTCAATGAGC
CGCCTTGCAG ACGCATTTTA TGCGGAACAA GAAGGAAGCG GTTTAGTTGT GAGAAATGTC
AGCTTATTTT CCAACGATCT CAGTCCTATG GAGTGGACTG CAATATCAGC ACAATCCGGA
GCAATCGTGG AAGTAGTAGG TTCAACAATC TCAGGGAATT CAGGTCTATT GTTTGCTTTA
CAAGCTGGTA TTGGCTCCGC TGTCTCTATA ACTGATTCGT CCATAAACCA AAACACGGCA
GCGGTAAGAA TACAGACGAC TCTCGTTTTG TTCACGTCAC TTCTTGCCTT AACCAGTTTC
CTTTCGTAGA GCTCGACAAG CGCTTCCATC TTCGTAATTG GTGGCTCGGC AATTGTCGAA
CGATCTGAGT TCACCCAAAA CTTTGGTTTT TCGGTAAGTT GTTCACAATC AGTGACGAAA
CCTCAAATCA CTATTACGAT GCAACTGATC TTTTGCTTCG TCCATTTAGG GAGAAATTTT
AGCTTTTCTG GGTGGCTCTG TTGAATTGAG TCAATCATGT ATCCAAGACA GTAGGTCGGA
TTTTGTAGCG TTCGCAGATA GCCAATCTAC CGTTTCAGGT GAAAACGCGA TGAACTTTGT
TGGTAGCTAC GAATCCTCGT TTTGTACATC TAGCGGGCCC CGACTCTTTC GCGAAGATGT
CGGGGCTGGC TGCTTCGTCG GCGGCCTATG CACGGGAACT TGTCGGAATA TTGCCGATGC
TTCTGAATGT ATGGCCCGCG CAGCAACCCC AACCTCAAGT CCGACTAACT TCCCCAATTC
GGTGTTACCG ACAGTCACCT CAACAGGTCA ACCCGATACG AGTATTCCCT CGTTTACACC
GGGATCCTTT GTGCCAAATA CCCAAATACC AATTCCAACT GTTGACCTTA CTTTTTCGCC
AACTACAGAT GATACTCTGC TTCCGACAAG GAATAGTGTT CCTGAAAGCA CAAACCTGCC
AACACTAGAA GTCCAACGTC CGACTTTGGC TTCAATTACA ACATCAGTAC CGATTACTCC
GCCGAGCGAA CCAACAGTAA TTCCGACCTC TGCTCCACCG GGTACAACCG TCACGCCAAC
AATGCTGCCC ACAAATGTGC ATGGCCAGAA CGGAACTCCG TCTCCAACAC AGAGATGCCG
ACCAGCAGGA AGCGGGACTA TGGCCAATTC TATCGGAAAG GGCAAGGGGG ACAAAAGCTT
CAAATCGTCC CGAGATTCTT CAAAGAATAT CCGAACACCA GAGTTCGGGA TTGAACAGTG
GGTGGACAAC AAATTATTGG ACGGACGTCA CACATGGTTC AGTACCCAAT CGAAGGAAGA
ACCTTTGTTC AACGAAAGCT TGCCCATTTG CCCTCCGGAA GAGTCTGCAA GGCCAACCGT
TGGTGCCGTA TCCACAAAGT CCGGTAAAGG AAAAAGAGGT GCTTCAGAGA AATCTTCGAA
GAAGGGTAGT ATGAGCGCTA AATCTGGAAA GGCAAAAAGC AGCAGTACCA AGAGTAAAAA
AAGCAGCGAC AGGAGTAGCT TCAGCAGCAA GAAGAAAAAG GGTGGTGTAC GTCGTGAAAT
TTGA
|
|---|
| Protein sequence | MALFPKVTVT IVTFVIALAW GFNDAVAQTV ACPQAEGLTG YTTIASINND MRAELARISD
GEKLPEDSYT YTLCPQTIFD VSNEPLQPIL SDVSFACGSN GEANDSCVLF GGSQQVLIVD
SLLNSYPLER ITFSGLTFSG FNQNSESRGT AIAAFASKPT SAIFRDALFR DFMSDFVILQ
STGEPGSEPM MIEINDSIVN GGTTGVFFDN DGGFLNIRNI QVEGLNAASF IATANGGVSR
LRESSISKGS LDSITYTTNS AEQQVADVNI FSMSRLADAF YAEQEGSGLV VRNVSLFSND
LSPMEWTAIS AQSGAIVEVV GSTISGNSGL LFALQAGIGS AVSITDSSIN QNTAASSTSA
SIFVIGGSAI VERSEFTQNF GFSGEILAFL GGSVELSQSC IQDSRSDFVA FADSQSTVSG
ENAMNFVGSY ESSFCTSSGP RLFREDVGAG CFVGGLCTGT CRNIADASEC MARAATPTSS
PTNFPNSVLP TVTSTGQPDT SIPSFTPGSF VPNTQIPIPT VDLTFSPTTD DTLLPTRNSV
PESTNLPTLE VQRPTLASIT TSVPITPPSE PTVIPTSAPP GTTVTPTMLP TNVHGQNGTP
SPTQRCRPAG SGTMANSIGK GKGDKSFKSS RDSSKNIRTP EFGIEQWVDN KLLDGRHTWF
STQSKEEPLF NESLPICPPE ESARPTVGAV STKSGKGKRG ASEKSSKKGS MSAKSGKAKS
SSTKSKKSSD RSSFSSKKKK GGVRREI
|
|---|
| |