| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31109 |
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| Symbol | PPO |
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| ID | 7199138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | + |
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| Start bp | 58197 |
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| End bp | 59969 |
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| Gene Length | 1773 bp |
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| Protein Length | 520 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | XP_002185274 |
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| Protein GI | 219130234 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCGTTCTAC ACTGTTGAGA GAATCGGAAG AGAAGAAAGT GATCGGGCTC TTTAACACAT
TCCTGAGCCG TCTTTGTCAG CTTCTTTTTG CTTCGTGAGT AAGATGATTG CACAATGCTT
TCTAGTAACT CTTAGTTTGG TGCAGTCGGC GGCTGCATTT GTGGCCCCTC GCGCGGCGTC
GCCCTTCACG GCATCGTCAC ATTTTCACTC CCCGATACCA CAACTATACG CAGCGGCTCG
AGAAGTTGAT TGCTTGGTTG TGGGGTCGGG CGTATCTGGA AGCTCTCTCG CCTTTAATCT
TGTAAAGAAC CACGATGTTG ACACCCTTAT GGTCGAGCGG AACGAAGTTG TCGGGGGCAA
TCTCATTTCG AAAGAAAACG AGGAAGGGTT TGTCTGGGAA GAAGGTCCCA ATTCTTTCCA
GCCTACTCCC TACATTAGTC GACTCGTTCA CGAATTGGGC ATAACGAAGG ACCTCGTTCT
CGCGGATGGG TCTTTGCCTC GTTTTGTGTA TTGGCAAGGC GAAGGTGCGG GCGCAAAGCT
GGCGAACTTA CACGCTTTAC CAACAAATTT ACCCGGGGAC TTGCTTGACT TCAACCTGTT
GACCTGGCCC GGAAAGATTC GAGCTGGGCT CGGTGCGATT GGCCTTATCG CTCCACCACC
GACGGATCGT GAAGAGTCTA TAAGGGAATT CGTTACCCGT CATTTGGGTG CCGAAACATT
TGAACGCGTG ATCGATCCGT TCGTGTCCGG TGTATATGCT GGAGATCCTG ACGAACTGGC
CATGAAGGCC GCTCTAAAAA AAATTCATCG ACTGGAAGGG CTAGGAGATC TTGGGCCGGG
TCTGGTCAGT GGTGCGATCA ATCGATTCAA GGAAATTGCC GACGAAAAGA CGTCGAACCC
ACCCGATCCG GCCTGGCCCA CTTACAAAGG AGGCCAGCTG GGTTCTTTCC GTAAAGGTTT
GCAAACACTT GCCCTAGCGG CGGAAGAATA CCTAGGACCG GAGCGTGTAA TGAAGAACAC
GCCTATAGAC AAAGTTGAAA AACTGCCCGA CGGTCGGTTT AAAGTAACGG TCCTGAAGGA
TGATAAACCG ATCGAAATAA TTGCTAAATC CGTCTGTCTG ACCTCGCCAA CCCGTGTCAC
GTGCAAGGTT GCCGCTGACT TGGTTCCGGC TGCCACTCGG CTGGCTGAAG TATACTCACC
TCCCGTTGCA TCTGTCACCA TGGCCTACAA GAAAGAGTGG TTTAAGGAGT TGCCCGGTGG
TACCTCGAGG GAACCTTTGC GTGGATTCGG CCACTTGCTT CCGCGTAAAA TGGGAGTCCG
GAGTTTGGGT ACCATCTGGT CGAGTTCTCT GTTTCCTGGT CGCGCTCCTG AAGGCTGGGA
GCTCTTGCTA ACCTACATTG GTGGTGCACG GGACAAAGGC ATTGCGGACT TGTCCGAAGA
AGAAATTTAC AAACAAGTCG ACGCGGATAA TCACGAGATT CTGTTGAAAA GTGACGCTCC
GTCTGGCAAA AGGATTGGCA TTCGAGTGTG GCAAACTGCC ATACCGCAGT ACCGTAAGGG
TCATTTAGAA ATTTTGGATG CATTGGAAGC CGACGAGGCC AAGGTGCCCG GGTTTTATTT
GGGAGGTAAT TACCGGACCG GTTTTTTTTT TTGTTGCCTT TGGTGATTGT GTGCAGTTTG
GATGGACGGA AGCCGAAAAG GTCGCAAAAT ACTTGCAATC GACCGAGGAA AATATGACTT
CTAGTGTAAC TGAACCGCAG GAAATTAGCG TAG
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| Protein sequence | MIAQCFLVTL SLVQSAAAFV APRAASPFTA SSHFHSPIPQ LYAAAREVDC LVVGSGVSGS
SLAFNLVKNH DVDTLMVERN EVVGGNLISK ENEEGFVWEE GPNSFQPTPY ISRLVHELGI
TKDLVLADGS LPRFVYWQGE GAGAKLANLH ALPTNLPGDL LDFNLLTWPG KIRAGLGAIG
LIAPPPTDRE ESIREFVTRH LGAETFERVI DPFVSGVYAG DPDELAMKAA LKKIHRLEGL
GDLGPGLVSG AINRFKEIAD EKTSNPPDPA WPTYKGGQLG SFRKGLQTLA LAAEEYLGPE
RVMKNTPIDK VEKLPDGRFK VTVLKDDKPI EIIAKSVCLT SPTRVTCKVA ADLVPAATRL
AEVYSPPVAS VTMAYKKEWF KELPGGTSRE PLRGFGHLLP RKMGVRSLGT IWSSSLFPGR
APEGWELLLT YIGGARDKGI ADLSEEEIYK QVDADNHEIL LKSDAPSGKR IGIRVWQTAI
PQYRKGHLEI LDALEADEAK VPGFYLGGNY RTGFFFCCLW
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