| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24006 |
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| Symbol | |
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| ID | 7199199 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | + |
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| Start bp | 176690 |
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| End bp | 179052 |
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| Gene Length | 2363 bp |
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| Protein Length | 749 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185286 |
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| Protein GI | 219130258 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACAAACCTG TAAATGTTGG CCCCGAATGT GTGGAACGTC GTGTTGTCTA CGAGACGAGT
GTGTGGTCGG ACACTTGCGA CGAACGGTCG GGTTGCCGTG ATGCGCAAGA CCCTTCGTCG
GACCCGCGGG TATTGGCATG GCCCCGGCGG CGACGGCGGC GGGCCTACCC GAGTCGATTG
TCGTTCCTTG TCCACGAATG TCATTCCCAC CAATACTCCG TTACACGACG GTCTTTTTGC
CATTCCGGAA CTCCAAACAC CGTCCGATTT TCTGCAGTGT GCCGTCCAAG CCATGCACCA
GTGCGATCAA TTGCGCGATG CACTCGGTGA CCGCCACGAC GACCACGCCA ATAGCATCAC
GTCGTCGTCG TCGTTGACCA AATCGTGTGC GGTGGATCGT TTGTACCAAC TCGACGAAAT
TAGTCGCGTC GTTTGCAACG TAATTGACGC GGCAGAATTG TGTCGTAGTA CCCACGCTTC
GGAAGAATGG CGTGACGCCG CCCACCGGGC CTTTGTCCTA CTCAGCGACT ACATTGCTCA
ACTCAATACC GATCCACGTC TTTATCGGGC ACTCACGACC ATATTCGGGA CGTCGTCGTC
CTCCACCACC ACCACATCGA ACTCCTCCAC TGCCCACGTC GCACCGTCCG TCTTTCCGGA
ATTGACGACG GAAGAACAGC GCTTCGCGCT TTTGTTGCGC GCCGAGTTCG AACGCGACGG
CATACACTTG CCGGAACACG AACGAGCGCA CGTACGGAAT CTCCAAGCGT CTCTCACCGC
ATTGGAAACC TCCTTTAGTC GCAATCTCGT TACGTCTCAC AAAACCTTTG CCGCACACGC
CCAGGACGTG GCTGACGTAC TGCCTCCGCA CGTACTCCAA GCCTACCACA TTGTCGTCCC
ACCTGTCACA CACGAATCAT CCACTGTCCA ACTCGGTACT TCCGAACCGC AAATATTGCA
AACACTCTTG CGCTACTCAA ACTCGCCGTC GTTGCGGCGA CAAGTGTATC TGGAAAGTCA
CACGGCCGTC CCGGAAAACT TGGAAATACT GGACGGCTTG GTACGGGTAC GCTACGAATT
GGCCCAAGCG CTGGGCTTTG ACTCGTACGC CGATCGCTTT CTGCGCGACA AAATGGCGGC
CCACCCGAGC AACGTGGCCA GCTTTTTGCA AACGCTGCAA CGCAGCAACT CTCCCTTGTA
CCGACAAGAA ATGACCATGC TGTCACAAGC CAAGCAACAA GTGGAAGGCA ATGACGTGGT
CGAGCCGTGG GATGTACCCT TCTATATTGG CCTTTTGAAA ACACGGGACG GCTTTGATGT
GCACGACGTG TCGGAGTATT TGACGCTGCC GCAGTGCCTC GATGGCATGA AAACGCTCGT
CGATAAGTTG TTCGGAATCA ATATGCAAGA ATGCGAATTG ACCGACAACG AACGATGGGA
CGGGCCCACT GTCAAGAAGG AAGAACGAAT TCGAAGGTTT GACTTTTTGG AAAAGAGCAC
CGGTCGGAAG TTGGGAACGA TCTACCTCGA CCTGCATCCG CGTGAGGGCA AGTACGGCCA
CGCCGCCCAT TTTACCGTCC GTTGTGGCTG TGTTCTGAAC GGACCCAGTG ATCCACCCAA
GTATCAATAC CCCATCGTGG CTCTGGTGTG CAACTTGTCT AGCACCAACA CAAACTTGTC
CCATGCCGAG GTCGAGACGC TCTTTCACGA ATTCGGACAC GCCCTGCATT CCTTGCTCAG
CCGAACTAGA TTTCAGCACA TGTCCGGAAC TCGTGCAGCC ATGGATTTTG TCGAAACTCC
CTCACATTGG ATGGAAAACT ACGCGTGGGA TACCGACTTT TTGAAAATTT TGGCGGTGCA
TCCGCAAACG GGCGCGTCGA TTCCCGACGA GTTGATACGG GCCCTGCAAA AATCACGGTA
CGAGTTCGCT GCGATTGAGC GCCAAAGCCA GATATTATAC GCCACGTTTG ATCAAAAATT
GTTCGGGGTA CCCACTACGG CCGATACAAC GGCTCTTTTT GGACAGCTCC ATCGAGAGAT
TGGCGTCCCC TACACCGACG GTACGCATTG GCATTCGCGG TTTGGCCATC TCGTCACGTA
CGGTGCGGGA TACTATGGCT ACTTGTATGC GCAAGTGTTT GCCGGCGACA TTTGGCGACA
CCTGTTTCAA GGGCGATCCA TGGAGCGAAA GTCGGGCGAC GAGCTGTGGC ATAAAGTATT
GATTCACGGA GGCGCCAAGG ACCCGAGTGA TATGTTGACT GATTTACTCG GAAGGCCACC
GCAGGTAAAT TCGTTTGGGC AATAAAAAGA CTACCACAAA CTCATGGAAA TGACCAATAG
AATAAGATTT TCGTGAGTGT GAA
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| Protein sequence | MLAPNVWNVV LSTRRVCGRT LATNGRVAVM RKTLRRTRGY WHGPGGDGGG PTRVDCRSLS
TNVIPTNTPL HDGLFAIPEL QTPSDFLQCA VQAMHQCDQL RDALGDRHDD HANSITSSSS
LTKSCAVDRL YQLDEISRVV CNVIDAAELC RSTHASEEWR DAAHRAFVLL SDYIAQLNTD
PRLYRALTTI FGTSSSSTTT TSNSSTAHRF ALLLRAEFER DGIHLPEHER AHVRNLQASL
TALETSFSRN LVTSHKTFAA HAQDVADVLP PHVLQAYHIV VPPVTHESST VQLGTSEPQI
LQTLLRYSNS PSLRRQVYLE SHTAVPENLE ILDGLVRVRY ELAQALGFDS YADRFLRDKM
AAHPSNVASF LQTLQRSNSP LYRQEMTMLS QAKQQVEGND VVEPWDVPFY IGLLKTRDGF
DVHDVSEYLT LPQCLDGMKT LVDKLFGINM QECELTDNER WDGPTVKKEE RIRRFDFLEK
STGRKLGTIY LDLHPREGKY GHAAHFTVRC GCVLNGPSDP PKYQYPIVAL VCNLSSTNTN
LSHAEVETLF HEFGHALHSL LSRTRFQHMS GTRAAMDFVE TPSHWMENYA WDTDFLKILA
VHPQTGASIP DELIRALQKS RYEFAAIERQ SQILYATFDQ KLFGVPTTAD TTALFGQLHR
EIGVPYTDGT HWHSRFGHLV TYGAGYYGYL YAQVFAGDIW RHLFQGRSME RKSGDELWHK
VLIHGGAKDP SDMLTDLLGR PPQVNSFGQ
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