Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16932 |
Symbol | |
ID | 7199175 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | - |
Start bp | 325931 |
End bp | 327235 |
Gene Length | 1305 bp |
Protein Length | 361 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185364 |
Protein GI | 219130420 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGACCGAGG ACGATCCGCA TCGCTTTCGA GTCTGCTTGC TACGGGAGAA GCATGTTCAG TATCTGCAAC AAGTCTGGAC AAAAGGAGAA CTCCTCGGTT CGTCTTTTGT CAGCCTGGAT GCAAGCCGTA CGTGGATGCT GTACTGGGCC TTGCACGCGA GCGATCTCAT GGGACACCGC CCGTCCGTGA ACGAACGTCG TCACATGCTA ACAACCTTGC AATCTTGCTG GACGGAATTC ACCGTGACGG CGCAAAACTA CAAAGGGTCT TCCGGAAACG ATAGCGAGGA TCCGCAGGCT ATATTACCGT CACCTGGCGC TACGTTGGGA GGGTTTGGTG GAGGGCCGGG ACAAATGCCA CACGCGGCCA CGACGTACGC TGCCGTCTTG GCCTTGAGTA TTTTGGCAAC ACACTGTGAA GATGACAATG ACATCAGTAC GGAAGATCAT GCAGTATCCG AATCAGCCAT GAAGCTTTTG CAACGCATCC GCCTACCAGT GTATAGCTGG ATGCTGTCGT TGCAAGAACC GGACGGTTCG TTTCGAATGC AGCACGATGG GGAAATCGAC GTACGCGCCA CGTATTGTGT CCTGGCAGTG GCCAAGCTGT TGAATATCTG CTGTACCGAA ACACTGGGCA GCAACAAAGT CGTCGAAAGC GTGGTACGCT GTCAGACCTT TGAAGGCGGC TTTGGCGGTG AACCGTGGAC GGAAGCCCAC GGGGGGTACA CATTTTGTGC AGTGGCGGCT CTGCAACTCC TCAATCGTGT AGATGCTGCC AATGTACCGG CCTTGACTCG CTGGTTGACA GCACAACAAT GTGGTTTCGA AGGCGGCTTT CAGGGTCGCA CCAATAAGCT CGTCGACGGA TGCTACAGTT TTTGGCAAGG CGGGGCCGCG TCCATCGTTA GTGCCTTTGT GGCCGCACAC CAAAAACAAT CATCTCCACA AACAGCTACA AATAACCACA ACGATCCTTG GCTAGAAAAT AGCAGTAGCG CCGATCGTAC CACTGATCAG CTACTGTTCG ACCAAGGGAT GTTACAGCGT TATGTTCTAC TTTGCGCGCA AAACGTAACT GGTGGTTTGC GGGACAAGCC GTCGGCACGT CGGGATTTCT ATCATTCGTG TTACAATATA TCGGGACTTT CCGTGGCGCA GCAAGTGGAC TCGTTACCAG ATTTTGGCCA TCCGTCAGAA TCCGTTGTAC ACGAAACGCA TCCCGTCTAC AATCTACGTA CTGAGCGTGT GCGGAAGATG CTAACGCACT GGCAAACGCA ACCAATCATA CTCGATCTGT CGTAG
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Protein sequence | ETEDDPHRFR VCLLREKHVQ YLQQVWTKGE LLGSSFVSLD ASRTWMLYWA LHASDLMGHR PSVNERSSGN DSEDPQAILP SPGATLGGFG GGPGQMPHAA TTYAAVLALN HAVSESAMKL LQRIRLPVYS WMLSLQEPDG SFRMQHDGEI DVRATYCVLA VAKLLNICCT ETLGSNKVVE SVVRCQTFEG GFGGEPWTEA HGGYTFCAVA ALQLLNRVDA ANVPALTRWL TAQQCGFEGG FQGRTNKLVD GCYSFWQGGA ASIVSAFLLF DQGMLQRYVL LCAQNVTGGL RDKPSARRDF YHSCYNISGL SVAQQVDSLP DFGHPSESVV HETHPVYNLR TERVRKMLTH WQTQPIILDL S
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