Gene PHATRDRAFT_16932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16932 
Symbol 
ID7199175 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand
Start bp325931 
End bp327235 
Gene Length1305 bp 
Protein Length361 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185364 
Protein GI219130420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGACCGAGG ACGATCCGCA TCGCTTTCGA GTCTGCTTGC TACGGGAGAA GCATGTTCAG 
TATCTGCAAC AAGTCTGGAC AAAAGGAGAA CTCCTCGGTT CGTCTTTTGT CAGCCTGGAT
GCAAGCCGTA CGTGGATGCT GTACTGGGCC TTGCACGCGA GCGATCTCAT GGGACACCGC
CCGTCCGTGA ACGAACGTCG TCACATGCTA ACAACCTTGC AATCTTGCTG GACGGAATTC
ACCGTGACGG CGCAAAACTA CAAAGGGTCT TCCGGAAACG ATAGCGAGGA TCCGCAGGCT
ATATTACCGT CACCTGGCGC TACGTTGGGA GGGTTTGGTG GAGGGCCGGG ACAAATGCCA
CACGCGGCCA CGACGTACGC TGCCGTCTTG GCCTTGAGTA TTTTGGCAAC ACACTGTGAA
GATGACAATG ACATCAGTAC GGAAGATCAT GCAGTATCCG AATCAGCCAT GAAGCTTTTG
CAACGCATCC GCCTACCAGT GTATAGCTGG ATGCTGTCGT TGCAAGAACC GGACGGTTCG
TTTCGAATGC AGCACGATGG GGAAATCGAC GTACGCGCCA CGTATTGTGT CCTGGCAGTG
GCCAAGCTGT TGAATATCTG CTGTACCGAA ACACTGGGCA GCAACAAAGT CGTCGAAAGC
GTGGTACGCT GTCAGACCTT TGAAGGCGGC TTTGGCGGTG AACCGTGGAC GGAAGCCCAC
GGGGGGTACA CATTTTGTGC AGTGGCGGCT CTGCAACTCC TCAATCGTGT AGATGCTGCC
AATGTACCGG CCTTGACTCG CTGGTTGACA GCACAACAAT GTGGTTTCGA AGGCGGCTTT
CAGGGTCGCA CCAATAAGCT CGTCGACGGA TGCTACAGTT TTTGGCAAGG CGGGGCCGCG
TCCATCGTTA GTGCCTTTGT GGCCGCACAC CAAAAACAAT CATCTCCACA AACAGCTACA
AATAACCACA ACGATCCTTG GCTAGAAAAT AGCAGTAGCG CCGATCGTAC CACTGATCAG
CTACTGTTCG ACCAAGGGAT GTTACAGCGT TATGTTCTAC TTTGCGCGCA AAACGTAACT
GGTGGTTTGC GGGACAAGCC GTCGGCACGT CGGGATTTCT ATCATTCGTG TTACAATATA
TCGGGACTTT CCGTGGCGCA GCAAGTGGAC TCGTTACCAG ATTTTGGCCA TCCGTCAGAA
TCCGTTGTAC ACGAAACGCA TCCCGTCTAC AATCTACGTA CTGAGCGTGT GCGGAAGATG
CTAACGCACT GGCAAACGCA ACCAATCATA CTCGATCTGT CGTAG
 
Protein sequence
ETEDDPHRFR VCLLREKHVQ YLQQVWTKGE LLGSSFVSLD ASRTWMLYWA LHASDLMGHR 
PSVNERSSGN DSEDPQAILP SPGATLGGFG GGPGQMPHAA TTYAAVLALN HAVSESAMKL
LQRIRLPVYS WMLSLQEPDG SFRMQHDGEI DVRATYCVLA VAKLLNICCT ETLGSNKVVE
SVVRCQTFEG GFGGEPWTEA HGGYTFCAVA ALQLLNRVDA ANVPALTRWL TAQQCGFEGG
FQGRTNKLVD GCYSFWQGGA ASIVSAFLLF DQGMLQRYVL LCAQNVTGGL RDKPSARRDF
YHSCYNISGL SVAQQVDSLP DFGHPSESVV HETHPVYNLR TERVRKMLTH WQTQPIILDL
S