Gene PHATRDRAFT_16840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16840 
Symbol 
ID7199221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011697 
Strand- 
Start bp301006 
End bp301611 
Gene Length606 bp 
Protein Length201 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185359 
Protein GI219130410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00215233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTC TGGGCAAGGT TCCGTTTGTA ACGAACGACA CCTTTATCGC TCCCTCGGCC 
TCGGTGATTG GCGACGTAAC CAACTGGGAC CAGTCTTCTG TCTGGTACAA GGCGGTAGTC 
CGCGCTGATT CGGAGCACAG CATTACAATC GGATTCTGCA GCAGCGTTGG CGAAGGCACC 
GTTGTGAACA CACTCTCCAG TACGGGACAA CTCGAAACGG GCCTGCCCCC GGACACGTAT 
ATTGGACACT ACGTGACCGT CGGTGCCGGA TGTGTGCTCA AATCTTGCCG CGTGGACGAT 
TTGGTCGTTG TTGGGGACAA GTGTACCATC TTGGAAGGAA GCTTGGTGGA GAATCACGTG 
ATTCTCAAAC CGGGGACCGT CGTCATGCCC TACCAGCGCA TCCCCTCCGG ACAAATGTGG 
GCGGGCAACC CGGCTGCCTT CGTGAGCGAA TTGACACCCG ACGAGAAGGA AGATATTCAA 
CAGCAAGCGC TCAAAATATT CACATCGACC AAGGAACATA TACTCGAATT CCTGCCGTAC 
GGACGAACCT TTGTGCATCT AGAGGAGTTG GAAAAGCAAG CTGGGCTGCA AGTCAAGCAA 
GGATGA
 
Protein sequence
MTFLGKVPFV TNDTFIAPSA SVIGDVTNWD QSSVWYKAVV RADSEHSITI GFCSSVGEGT 
VVNTLSSTGQ LETGLPPDTY IGHYVTVGAG CVLKSCRVDD LVVVGDKCTI LEGSLVENHV 
ILKPGTVVMP YQRIPSGQMW AGNPAAFVSE LTPDEKEDIQ QQALKIFTST KEHILEFLPY 
GRTFVHLEEL EKQAGLQVKQ G