| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50326 |
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| Symbol | |
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| ID | 7198985 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011696 |
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| Strand | - |
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| Start bp | 311233 |
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| End bp | 315060 |
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| Gene Length | 3828 bp |
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| Protein Length | 998 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185257 |
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| Protein GI | 219130196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.455166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGACC TGAACGATCT CTTTGGAGCC TTTGACGGAA ATGACAGCGA CCATGGCAGC
AGCTCGTTGC AGGATGAGCC AGCAGTACTA CCGAAGAAGC CGCGACTGGA AGAAAGAAAT
AGCCAGCGGA GCAGTAGTCC ACCAGAAGAT GAACTATCCA ACAGTGTGTC TACTACACCT
GCTCCCGGAA CCGCTACTGC GACTAACGAA TCCATCCAGA GTAGCAAGTC GGCCTATTCC
GCCGTCATGT CCAAGCCCAC GGCTTCCCAT TTGCGACCCG ATATAACTAC CGATACTTCC
CACGGCAGAG ACCCGGACGG AGTGGTGGCG GAGACTGAGG CGGACGTCAA CCGGGAAATT
GCGACGGGTA CATCCCACGA CAAGACAGTC CGCTCCTATT CGGCCTTTCC CAAAAACTTA
CCCGCGGGTT TTGCCCCACC CCGAGTCGAA CCCCCACAAG AACCCGCCAA GACGTACGCC
TTTAAGCTGG ATCCCTTTCA GGCGCAGGCC GTGGCCTACA TTGACAAGGA AGAATCGGTA
CTGGTTGCGG CCCATACATC AGCGGGAAAA ACTGCCGTGG CGGAATACGC CGTCGCGAAG
TCACTCAAAG CGGGACAGCG CGTCATCTAC ACGTCCCCGA TCAAGGCTTT GTCGAATCAG
AAATTCCGGG ATCTACAGGA AGAATTTGAT GATGTCGGAC TCATGACCGG TGATAGTACG
TTTTTACCAC AATGTCGTCG TCGTTGTTGT TGGTGTTATC GACTCATGCA AACTCGTTGT
GTTAACCACT CGTATGCTCC GTCAATTTGC AGTCACAATC AATCCCGACG CTACTTGTCT
CGTCATGACG ACGGAAATTC TGCGCAGCAT GTTGTACCGT GGCAGTGAGC TCATGCGAGA
AATATCGTGG GTCATTTATG ACGAGGTACA TTACATGCGT GATGCCGAAC GCGGCGTCGT
TTGGGAGGAG TCCATCATCT TACTGCCCCA TCGGGTCCGA TTCGTCTTTT TGTCCGCCAC
CATTCCCAAC GCCACCCAAT TCGCTGATTG GATTGCCGAA ATTCACCACC AACCCTGCCA
CGTCGTCTAC ACAAATTACC GGCCAACACC GCTCCAACAC TACATTTTCC CCCAAGGCGG
GGAAGGCCTG CACCTGGTCG TGGACGAGCG TGGCAAATTC CGTGAAGCCA ACTTTCAAAA
GGCCATGGCC AGCTTACAGT CGGGTAACGT TGATGTAGCG GCCGCGAATG CAATGTTGGA
TTCGGGGAAC GGCAAGGGAA ACGCCAAAAA ACGCGGTCGG GGTAAACAAG GTGGAGGTGC
CGGCCAATTT GCGGATTTAC ACCGAATTGT AAAACTCATC ATGGAGAGGA ATTTGAACCC
ATGCATCATC TTCTCGTTTT CGAAAAAAGA CTGTGAAAAG TACGCGCTAG CTTTGAATCA
AGAAGACTAC ACGGACGACG TAGAGAAGGA TTTGGTGGCG CAAGTGTACC ATAACGCAAT
CGATTCGTTG AGTGATGACG ATCGTAAATT GCCGCAAGTA GAGGCACTAT TGCCTTTGTT
GAAACGCGGA ATAGGAATCC ATCACGGCGG ATTACTTCCC ATTCTAAAAG AAATTGTTGA
AATTTTGTTT ACGGAGGGGT TGATCAAGGC ATTATTTGCG ACCGAAACAT TTTCTATCGG
TGTGTCCACG ATATTGAAAT CAGGCTACCC CTTATATTGT GTCATTTTGC CTGACACTCT
TTTCTTGTCT ACAGGTATCA ACGCTCCTGC TAAAACGGTT GTTTTCACCA ATACTCGAAA
ATGGGACGGG AAAGATTTCC GATGGGTATC TAGTGGGGAA TATATTCAAA TGAGTGGTCG
TGCTGGTCGT CGCGGAAAAG ACGATCGCGG TATCGTTATT CAAATGGTCG ATGAAAAGAT
GGAACCTGCG GTTTGTAAAG ATATGCTGTA CGGTGCTCCA AATCCTTTAA ACTCGAGCTA
TCGAATTTCT TACAATATGC TTTTGAACCT TATGCGCGTG GAAGATGTTG ACCCTGAGTA
CCTTATTCGT GCCTCATTTC ACCAGTTTCA ACGAGAAAAG GATGCTCCAG GATTGATTGC
TGACGCTGAA ATCCTAGAAT CCCAAGCAGA GACAGTAGAC TTTCAATCCG AAGAAGAAGT
GACGTTGGTT GCGGAATACT ACCAAATGGA CCAGCAGCTT CTATTGACTC GACGCAAAAT
CGGCACGATT GTGAGAAAGC CGGGTTATGT TCTTAAGTTT CTGCAAGCTC CCGGGCGCTT
TCTGGATGTC ATTCTTGACG GGGAAGAGTT CGGGTGGGGT GTTTTAGTCT CCTGCAAGAA
GCGCCAAGGA ATCGGATCGG GAGGAGAAGC TGGTCGCATT GCATCATTGA CCAATCAGCC
TGAATACATT CTGGATGTTC TTTTGAATTG TGTCGATCGG CATTTCGACA AAAACAGGAA
AGGAAAGGAT GAAGATGCAG AGAACGTAAA CCTTCTGTGG CGAGGGACGG GCCGATCGTG
CCGCCCTGTT CGCAGTGGAG ATATAAGCAA GTTAATTTCG ATGAGGGTCT TCACAGTTGG
GCTCGACAGT ATCGAACGCC TTTCTGCGGT TCGAATCTTC ATTCCGCAAG ACATCACAAC
CCCCGAAGCC CGTCGCAAAG TCTCCACGTC TGTCAAGGAG GTTTCGAAGC GCTTTCCAGA
TGGTATCCCC TTGCTCGACC CTGTGGCCGA CCTTGGCATC AACGATGATG CTTTTATGAC
ACTACTGAAG CGGGCTGAAA CACTGACAAA TCTCCTGGCG GAACATAAGC TGGCGAACGA
TTTTGTGGAT TCAAGTCGCC TTGAACTAGT TCAACGGTAT GAGAAGAAAG CTGATATGTT
GGAACGGGCA AAGACATTAC GCGAAGAGGC GCGCAACTGT CAAACGATGG CAATGAAAGA
TGATCTCAAG AAGATGAAAA GAGTTCTCAA GAAGCTCGGC CATGTCGATG CAGGCGGAGT
AATTCAGACG AAAGGTCGGA CTGCATGTGA AATTAACACC TCGGATGAGC TTGTTGTTGT
TGAGCTCATT TTTGGCGGCA TTTTTAATGA TCTTTCTGTC GAGCAAAGTG TCGCGCTTCT
ATCTTGTATG ACTTTTGACG AACGCAATAA AAATGAAGAT GATCCCGCAA GTGGCTTGAA
GAGCTTTCTG TCCAACCCTT TTTACAAACT TCAAGAGGTA GCACGGACTG TTGCACGCGT
TGTAATTTCC TGCGGAATCG ACCTGAACGA GGACGAGTTT GTGGACAAAT TCAACCCGGG
GATGTAAGTG CTTACACAGT GCTATGTTCG AGCACGTCCT GCTGCAATGA TTATTCTTTT
CAAGTCATCC ACATCCAATC TGTTGGAGCC GCAAAGCTTT GGCTTTGGAG CTCGCAGAGA
GGAACAAAGC GGATGACCCT ACCAACGCTG AGGATCATCA AAGCGACCAT ACTCTCTGAG
CAGCTTTACC ACTGACCTTA TTGTTCGCAA TCTTTGGCAT TTCACTTACA CCCTTTGATC
CCGATTTAAC ATGTAGGATG GAGGCTGTCT TTGCTTGGTG TAAAGGAGCA AAGTTTATCG
AAGTCCAAAA GCTTACTGGG TCGTTTGAAG GCACTACAAT TCGAACTTTG CGTCGGCTCG
AAGAACTCGT TCGGCAGATT ACTGCTGCGG CGAAAGCCAT TGGAAACCAC GAACTGGAGG
CAAAGTTTGA AAAAGGAAGT GAACTGATCA AACGAGATAT TGTCTTTTGC AGCTCTCTTT
ATTTGTAACA TTCTAGAATA ATACCGTGAG CAGGCCATGT TCACGACC
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| Protein sequence | MADLNDLFGA FDGNDSDHGS SSLQDEPAVL PKKPRLEERN SQRSSSPPED ELSNIRSYSA
FPKNLPAGFA PPRVEPPQEP AKTYAFKLDP FQAQAVAYID KEESVLVAAH TSAGKTAVAE
YAVAKSLKAG QRVIYTSPIK ALSNQKFRDL QEEFDDVGLM TGDITINPDA TCLVMTTEIL
RSMLYRGSEL MREISWVIYD EVHYMRDAER GVVWEESIIL LPHRVRFVFL SATIPNATQF
ADWIAEIHHQ PCHVVYTNYR PTPLQHYIFP QGGEGLHLVV DERGKFREAN FQKAMASLQS
GNGNAKKRGR GKQGGGAGQF ADLHRIVKLI MERNLNPCII FSFSKKDCEK YALALNQEDY
TDDVEKDLVA QVYHNAIDSL SDDDRKLPQV EALLPLLKRG IGIHHGGLLP ILKEIVEILF
TEGLIKALFA TETFSIGINA PAKTVVFTNT RKWDGKDFRW VSSGEYIQMS GRAGRRGKDD
RGIVIQMVDE KMEPAVCKDM LYGAPNPLNS SYRISYNMLL NLMRVEDVDP EYLIRASFHQ
FQREKDAPGL IADAEILESQ AETVDFQSEE EVTLVAEYYQ MDQQLLLTRR KIGTIVRKPG
YVLKFLQAPG RFLDVILDGE EFGWGVLVSC KKRQGIGSGG EAGRIASLTN QPEYILDVLL
NCVDRHFDKN RKGKDEDAEN VNLLIERLSA VRIFIPQDIT TPEARRKVST SVKEVSKRFP
DGIPLLDPVA DLGINDDAFM TLLKRAETLT NLLAEHKLAN DFVDSSRLEL VQRYEKKADM
LERAKTLREE ARNCQTMAMK DDLKKMKRVL KKLGHVDAGG VIQTKGRTAC EINTSDELVV
VELIFGGIFN DLSVEQSVAL LSCMTFDERN KNEDDPASGL KSFLSNPFYK LQEVARTVAR
VVISCGIDLN EDEFVDKFNP GMMEAVFAWC KGAKFIEVQK LTGSFEGTTI RTLRRLEELV
RQITAAAKAI GNHELEAKFE KGSELIKRDI VFCSSLYL
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