| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50257 |
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| Symbol | |
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| ID | 7199106 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011696 |
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| Strand | - |
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| Start bp | 123241 |
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| End bp | 126010 |
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| Gene Length | 2770 bp |
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| Protein Length | 900 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185211 |
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| Protein GI | 219130100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.475723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGG GTGCCCTAGC ATTACCGACC ATGTCTTTGA ATTCGAAGCG AAAGGCTGGC
GAGCATGGTC TTCGACAAGG CGACTCGACG ACAGCACGGC TGTTCCTCGC CTTCGCGTGT
TTTTGGCCAT TAATGATTAT GGCCTTGTTT GCGGCCTCTT CGCCTCGGGT AAAAACATCT
ATTCCCGGGA ACGCTTCGGT GCCTGCTTCG AATAATTTGC GCATGGAGAT TCGCAACGCT
CTGGATCGCG TCGATATCAT GGGGTACGGC CCTACGCACC CTCGCGTTGC CGTAGTTGTC
GTCGGTCGCG ATCGGCAAAA CCTTATCGCT TCCGTCGAAT CAGTCTTTTC CAAAACAGAC
ATGGATCGTA TCTTTGTGGT AACCGTCGTC GTCGACGGCA TGGCGGAAGA CTTGACCTTG
GTCCAGGACT TGCAAAAGAT TGACGGTGGC ACTATTCCTC ACTGGCATGG CCAAACACCC
GACTTGCACA ATGCCGGTGC GACACAGCCC AAGGAAGAGG AAGCGCATGG CCGCAAGGTA
CACGTTATTT TCAACGCCAG GCAAAGGGGT GTAACGGCGT CGCGTGCGGA TGGTGTCGAA
TTTATTCGTT TGTTATCCGA GAAGCACGAA CAAGCGGCCT TAAAATCTCC GCAAGAAGAT
TTGTTGCTCT TGTTGATGGA GGGCGGTACT CAGCTGGAAT CACGGCGATG GTTGTTACCC
GTCACACAAG CTCTCATTGT TCCTCCGCCT CTTTTGGGTA AGGAAGATTC TACCGTGGCA
ATGAAGTTGG CCAACGCAGT CTCTTTTAAC CTTGAGGGAC CCGGTAAGCG AACGTCTTTT
GATGAAACGT TGGCGGCGGT CATTTCCGAG TCCAGTGCGG AAGACATGAA TCAGAACAAC
GGCGACTCTT ATCCAACACC GGCATTAAAC GGGGCAGCTA TTGCTTTGCG ACTCGATACG
TATTTGAACC TACCAATTCA CGATGAATCG CTTCAAGAAG CCTGGCCTGC GAATCTGGAT
CTAGCAATGA ACCTCTGGTT GTGCGCTGAT GGAATCGACA TGCTGGAGGA CGCAAAAGTT
ACAAGCATAG ACGCGTCGCC TCCTGCGGCA TCCTTGCTTC CTCAACAGGC GGCTCGTTTT
GCAGCAGCGT GGATGGACGA AACGCTTGCA AAAAAGTTTT TCAACGCCTA CACCAAGACA
GCCAATCCAG ATATGACGTA TCTGGAATGG GAAACCTTCC AATCCGCTGC GAGGCAAGAA
CCAGGATTCA CAGCCATGAC GTCCAGATGC CGTGACTTTA AGTGGTTTAT CGACCGCGTC
AATCCAGAGC TAGGAAACGT CTTACAAGCA TCGGAGGAAC TGCCTAAAGG GAAACCTATG
GCAGCAAATA GCGAAACAAG CGCGAAGTCG GCTGATGCCG TAGAAGGTAA TGCAAACACG
GCCGAACGTG CTAACGAAAA GACACCAGTT GTACCAGGCA AAACACCATT GCATGGTGAA
CGTAATGACA AGGAAAGGCA AGAGGTGGAT GGGAGTGAGG AGGAGTTTGT CATTCCAGAA
AGGCACGACC AAAAAAAGCC TACCAAACCT CTCTGCAAAG AGTGCCTTGA AATCGTCCAA
CGAGCGAGGC CTGTAGAGAT TGCATATGTG GATATGTCAA ACGGTCACCG CGAAGACCCT
CACAGGGGGG CTCGAGACAC TGACGGTAAC TTTGGGTATA CACACGATGA GACGGCTTTG
CGCAAAAACC CACCTGCAAT CAACTTCATG GGAGATGATC TGGCACGAGC CTGTAGCAAA
CGAGACAACA ACTACCGCAT GCTGCATGAA AAAGTAAAAA TCGATTTTAA GGCGCACGCT
GAAGCCGAAA AGTCTCTACA AAAGCGTGAC AAAATATTTT GCGGAATTTA CTCGATCGAG
AGTGCACACC CTCGAATCCA GAGGATTGCC GAGACGTGGG GGTAAGATCA TATGTGATTT
AAGTGCTTGA ATGGAACTGC TGAGTCCTCA TCTCTATCCT TTTCATAGAC AAAAATGTGA
TGGCTTTATT GTTGCATCCA ACAAAACTGA TGCCACACTG AATACTGTCG ACATTCCGCA
CGAAGGCCCG GAGGACTACA GTAATATGTG GCAGAAAATA CGGAGTATGT TAAGCTACAT
CTATGACAAT TACTACGAAA AGTACGACTG GTTCCATATG GGCGGCGATG ACCTGTATAT
CTTGGTCGAG AACCTACGCC TGTATCTTGA AAGCGAGGAG ATCAAGACCG CAGCGAATGG
TGGAATATAC TTACCCGATG GTACAGAAAC GACGCAAGTT CCTCTTTTTT TGGGTCGACG
CTTCGCTTAC ATGGGAGATA TGAACGACAT TTTCAACTCT GGTGGTTCCG GTTATACCAT
GAATAAGGCG GCGCTCAAAA CGTTGGTAGT CGACGGCTTT CCCAATCTTT TCTCTCACGC
CCACACCTTT TCAGAGGACA CAATGGTGGC GAGGACGTTT AGACACTATA ACATATTCCC
ATACGAGACG AAGGACGAAA ATGGTGGGGA GCGATATATG CCGTTTATGC CAGGTCACCA
CTACGGTTAC CGTTTCCCGA CCGACAAGAG CACAGACTGG TACGCCAAAT ACTCCATCAA
CATCAAAGAA GGTTTGGACC ATTGCGCAGC ACACAGTGTG GCATTTCACT ACGTTAAAGA
TGAAGCGATG TATCGATTGC ATGCGCTTCT ATATGGTCTC TGTCCTGCGG AACCTGCACT
AGAGTCGTAA
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| Protein sequence | MATGALALPT MSLNSKRKAG EHGLRQGDST TARLFLAFAC FWPLMIMALF AASSPRVKTS
IPGNASVPAS NNLRMEIRNA LDRVDIMGYG PTHPRVAVVV VGRDRQNLIA SVESVFSKTD
MDRIFVVTVV VDGMAEDLTL VQDLQKIDGG TIPHWHGQTP DLHNAGATQP KEEEAHGRKV
HVIFNARQRG VTASRADGVE FIRLLSEKHE QAALKSPQED LLLLLMEGGT QLESRRWLLP
VTQALIVPPP LLGKEDSTVA MKLANAVSFN LEGPGKRTSF DETLAAVISE SSAEDMNQNN
GDSYPTPALN GAAIALRLDT YLNLPIHDES LQEAWPANLD LAMNLWLCAD GIDMLEDAKV
TSIDASPPAA SLLPQQAARF AAAWMDETLA KKFFNAYTKT ANPDMTYLEW ETFQSAARQE
PGFTAMTSRC RDFKWFIDRV NPELGNVLQA SEELPKGKPM AANSETSAKS ADAVEGNANT
AERANEKTPV VPGKTPLHGE RNDKERQEVD GSEEEFVIPE RHDQKKPTKP LCKECLEIVQ
RARPVEIAYV DMSNGHREDP HRGARDTDGN FGYTHDETAL RKNPPAINFM GDDLARACSK
RDNNYRMLHE KVKIDFKAHA EAEKSLQKRD KIFCGIYSIE SAHPRIQRIA ETWGQKCDGF
IVASNKTDAT LNTVDIPHEG PEDYSNMWQK IRSMLSYIYD NYYEKYDWFH MGGDDLYILV
ENLRLYLESE EIKTAANGGI YLPDGTETTQ VPLFLGRRFA YMGDMNDIFN SGGSGYTMNK
AALKTLVVDG FPNLFSHAHT FSEDTMVART FRHYNIFPYE TKDENGGERY MPFMPGHHYG
YRFPTDKSTD WYAKYSINIK EGLDHCAAHS VAFHYVKDEA MYRLHALLYG LCPAEPALES
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