Gene PHATRDRAFT_50256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50256 
Symbol 
ID7199026 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp122277 
End bp123250 
Gene Length974 bp 
Protein Length175 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185129 
Protein GI219129929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCCGCCAGC GATCGCGAAA AAGATACCTT TAGCACTCCT TAGCGTCATT TTATGAAAAA 
GAAATTGTTC GTGTGTATCA TAAAAATGTA TAAAAGATAT TCTGTTGCCG CTTAGGATAG
CTAAACTATC TGTGAAACAC TTACCTAATT CAACCCACTT GAGACCGGAG CTGCACTCTT
GTCATACCAT AACATCAGAG ACATAGTTTG ATTCGTTTGC TTTCTTTGCC TTACATCGGA
ATCTTCGTAA GCATGAAGAG TGCTGCTTTT CTCCTCTTTT TATCGGCTGC CGCGGCGTTT
GCCCCTCAAA GACGAACCCA GTCGTTCATA TCGTCGAAGA ACAGTGAGTG TCATTGACAG
AAAAGGATGT CATATCTTGC AAATTGGAAT TGGATTGTCT TGTCACGACG AAGGTGATGA
CGTTGTCAGC TATTCTCTCA TTTTTGCGGT CTTCGTCTCT CTAGTGGGAT ACGTGCCTGA
TGGAATGTCA CCTGAGGAAT ATCGTAAGCT TCGTCAAAAG GAACAAGATA AAGTGAAAAA
CAAGCGCTTC GGTGCTTTCG GACCACAAAC TTTCAAGTCT CGATCCATGC AGGCCTTCCA
GAAGGATTTA GAGGAAGGCA AAGGCGGTCA CTTAATGCCA GTTTTTAATG CAAAGGAAAA
ACTAAAATCG GGCAAGATCA AGAAGGAGGA TATCCCCTAT ATGCAGCGTC TTGGTGCGTG
GGACAACAGT GACGTGCAGA ACGCGAAGAA AAAACAGTGG AGAGGATCGG ACAAGAAGTA
CAATCAGAAC GCGGATCAGG GAGGTATTGG ATGGTCGGGC AATACCCCTG TGCGTGGTCC
GCAGTCTATT TCGAAGTCAG AGCAGAAAAC TCCGAAGAAG AAGTTCTTCG GACTTTTCTG
ACGCATCTTG AAGACTTTCA GTTTGGAAAT AAGAAATGGG CAGTACAAAG TAATGTAATC
CAATTTACGA CTCT
 
Protein sequence
MKSAAFLLFL SAAAAFAPQR RTQSFISSKN MGYVPDGMSP EEYRKLRQKE QDKVKNKRFG 
AFGPQTFKSR SMQAFQKDLE EGKGGHLMPV FNAKEKLKSG KIKKEDIPYM QRLGAWDNSD
VQNAKKKQWR GSDKKYNQNA DQGGIGWSGN TPVRGPQSIS KSEQKTPKKK FFGLF