Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50256 |
Symbol | |
ID | 7199026 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 122277 |
End bp | 123250 |
Gene Length | 974 bp |
Protein Length | 175 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185129 |
Protein GI | 219129929 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTCCGCCAGC GATCGCGAAA AAGATACCTT TAGCACTCCT TAGCGTCATT TTATGAAAAA GAAATTGTTC GTGTGTATCA TAAAAATGTA TAAAAGATAT TCTGTTGCCG CTTAGGATAG CTAAACTATC TGTGAAACAC TTACCTAATT CAACCCACTT GAGACCGGAG CTGCACTCTT GTCATACCAT AACATCAGAG ACATAGTTTG ATTCGTTTGC TTTCTTTGCC TTACATCGGA ATCTTCGTAA GCATGAAGAG TGCTGCTTTT CTCCTCTTTT TATCGGCTGC CGCGGCGTTT GCCCCTCAAA GACGAACCCA GTCGTTCATA TCGTCGAAGA ACAGTGAGTG TCATTGACAG AAAAGGATGT CATATCTTGC AAATTGGAAT TGGATTGTCT TGTCACGACG AAGGTGATGA CGTTGTCAGC TATTCTCTCA TTTTTGCGGT CTTCGTCTCT CTAGTGGGAT ACGTGCCTGA TGGAATGTCA CCTGAGGAAT ATCGTAAGCT TCGTCAAAAG GAACAAGATA AAGTGAAAAA CAAGCGCTTC GGTGCTTTCG GACCACAAAC TTTCAAGTCT CGATCCATGC AGGCCTTCCA GAAGGATTTA GAGGAAGGCA AAGGCGGTCA CTTAATGCCA GTTTTTAATG CAAAGGAAAA ACTAAAATCG GGCAAGATCA AGAAGGAGGA TATCCCCTAT ATGCAGCGTC TTGGTGCGTG GGACAACAGT GACGTGCAGA ACGCGAAGAA AAAACAGTGG AGAGGATCGG ACAAGAAGTA CAATCAGAAC GCGGATCAGG GAGGTATTGG ATGGTCGGGC AATACCCCTG TGCGTGGTCC GCAGTCTATT TCGAAGTCAG AGCAGAAAAC TCCGAAGAAG AAGTTCTTCG GACTTTTCTG ACGCATCTTG AAGACTTTCA GTTTGGAAAT AAGAAATGGG CAGTACAAAG TAATGTAATC CAATTTACGA CTCT
|
Protein sequence | MKSAAFLLFL SAAAAFAPQR RTQSFISSKN MGYVPDGMSP EEYRKLRQKE QDKVKNKRFG AFGPQTFKSR SMQAFQKDLE EGKGGHLMPV FNAKEKLKSG KIKKEDIPYM QRLGAWDNSD VQNAKKKQWR GSDKKYNQNA DQGGIGWSGN TPVRGPQSIS KSEQKTPKKK FFGLF
|
| |