Gene PHATRDRAFT_50224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50224 
Symbol 
ID7199090 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand+ 
Start bp41025 
End bp41899 
Gene Length875 bp 
Protein Length134 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185109 
Protein GI219129887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACGAAAGGC GTCACTGTCT CCTCCACTTA CTCATTGTCT TTCGCCATTT CAGGTTTCTC 
GAAGGGAAAA TTAAACTGGC CTGTAAACTG TGATTATTAA AGGCCATGTG GAATCTCGTT 
TTATTACTCT CCTTGGTACC GACTCCTCAT GCGTGGGTAC CAACCCGCTC AAACACGCGT 
CGGATCGCGT TGTCGACAAA GATCATGGCC CTACCGATGG ACGATCTCGC TAAAACCGGC 
GACGAGCAGA ACCCATGCTG GGAAGATCTT TATGATGACG ACTGTGTAAT GAGCAACGCC 
GCAGCCGCCA ATTTTGTTGC GAGTAAATGG ATCAAAGGAT TGCCTTGTGG GCAGGGACTT 
GAGGTTCGTT CATGGCAGTT TTTTGTACCA GCTCCAAGCT GAGAATATAC GACGTCACTT 
GGGGTCTAAT GTAAATGAAT TGTCTTTTGC TTACACTAAT TTGATTTAAT GGCTTATTTT 
TTTGGTGCAC AGGACTGCGA TATGCCTGAA GATCTAACGT TACCCGAGAC AAGACCTGAA 
GCTGGCGTTG ACCATGTTGA TGTCATGGAG TTTCTTGGTC TACATAGGGC AGAAGGGATC 
AACAATGATA AAAATAGAGG CTCTTTTTTG CAGCCGTGAA TAAGATGAGA ATTGGATCCA 
GTTGAGCCTT GTAGTAAAGA CAATCATTGC ATCAACAAAA CCGCTTCTAT TGATTGTATT 
GTGGACATTG GCTGCAATGT GACCGTACTC CACTTGCTCA CGGAATACAT TCTCTGAGAT 
GAGCCATATC TTTTGCTGAC TTTATAAAGA GAGATTTCTG TGTGTAATTA GAAAACCCCT 
ACGGCAAGCA TCCAGATGGG GTTGTTATGA GTTTT
 
Protein sequence
MWNLVLLLSL VPTPHAWVPT RSNTRRIALS TKIMALPMDD LAKTGDEQNP CWEDLYDDDC 
VMSNAAAANF VASKWIKGLP CGQGLEDCDM PEDLTLPETR PEAGVDHVDV MEFLGLHRAE 
GINNDKNRGS FLQP