| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50220 |
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| Symbol | |
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| ID | 7199004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011696 |
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| Strand | - |
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| Start bp | 27589 |
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| End bp | 29410 |
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| Gene Length | 1822 bp |
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| Protein Length | 576 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185191 |
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| Protein GI | 219130058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.265161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACA TTAAAAATCT GGACAAATCT GGTGGTATTC CAGATTACGA GGACTTAGAC
CTGGCTTTCG ATGATCTTCT GGAATCTGAA AACGATCCTA CAATCTTTCG TAAACCGACT
CCGAGTTCGA TCGAAAACGA CGGTGAATTG ACTGGGAGCA AGCAGAGAAA AGACAGTCTG
CCTGACGAAT CATCGCATGA TTACATATTG GGAACTCTAG TTGTCCGCGT AGTAGCCGCA
CGAGACTTAG AGCCTGCTAG CAAGCATAGT TTGGGCAAGA TGATTTTTGG AGGAGCGCAC
CATTCGAGAA ACAAGGGATC AGCCAACCCG TATGCATCCG TGCGCTTCGG CAGTACGACT
CAGAGAACTT CGGAGGTTTT TGATACCGTG AACCCAATTT GGCCGAGATC GGAAACAATG
TACATGGATG TCTCTCATCC TAGAATTCCG GATCACGCTA CACAACAGCC AAAATCGGGT
ACAGTCCCGT CAATTGTCGC GACAACGGAA AGTTCAACGC AGATCTATGA ACAGCCCGGT
AACCCCCCTC AAAAGCCAAA AGCGTCCACA AGCTTAGCGA CGCATAGCAT TTTTGAAAAA
GAACAAGTCG AATCTATGCT AGAAATGAAT GAAGCAAAAG ATCTTTACAA ACCATCTCGG
CCTATTTTAA CGGTTGCTAT CTTCCACGCC AATGAAATAG GTACTTTGAA GAAGTACAAC
CCATCGAAAG GCGATAGCGA TGATCTCTTT TTAGGAATGG TTGCAATTGA TTTGACGCCA
GTATTGACTG GGAAAACAAC TATATTTGAC CAGTGGTTGC CTCTAACAGG CACTGAAAGT
ACCCGTACTA CGGTGCGAAT TGTCTGTGAG TATGAAGCGA GCGATACCGC GCCCCAGTCA
CTAGATTGGG TTCATTTTAC TAGATTTTGT GATCCCGCCG ATTTTTACCC GGCTCATGGT
GATCGCTTGT ATAAAGTGGA AAGTTGTGAC GGTGACAATG TCACATTGTC ATGGACGAGT
TCGGAAGGTT GGGTGTCATC GTTTGTGGTA CATCGCAACA TGTTGGTGTG CGCCGCACGG
CATCAAGGGC CTATAGAATT TTATCAAGAC GAGATTCAGT CAATTGCAGA GAGATTGGGT
CACTCTCCGA TGGTTGACAC TGTTCAAGAG ACTCTCCGTA CGCTTCCCGA CGAAGGATTA
GTATCAGTTA GTGTCGACAT ATTCCGAGGT GGAACGTCGC TCCTTAACCG ATGGCTCGAT
CAAGGTGTTC GTACGATCAT TGACGACATC AAATTCGCGA CAAATATCGA TGGACGACAC
AATCCTAATT TTGAAGACAG CTTAGCTACC GATACGCTTG ATGAAGCCAG CGATTCCATA
TCCCAGGCAG CATTTGCTAG ACACTCGGTG GAAAAGTCCG AAGTCGAGTC TGCTATGGGA
ACAAACTTAC AGCCCCTTCC CAATATGCCA GCGTGTCCCA TCACAGGGGA GCCCATGATT
GATCCCGTCG TTGCCGCCGA TGGCCACACA TATGAGCGCT TTGCCATAGC ACGCTGGCTT
CATGAGAGCG ACAAAAGTCC GCTGACGGGC TCAATCTTAC CACACAAAAG TCTTGTTCCG
AACTACATGC TGGTGTCAAG CCTTCAAGAA TGTGCCGTAA TTTCTGTCGA GGAGGATCTA
CCAGTTGGTA ACGACGACGG ACCACTGGTA GAAGTAGTAC GGGATGTGTA GGGATTCAGC
ACCTCCGTCC TTTCGTTTAT CTCTTGCCCT TGAGTCTTTC GAAAGTATAA GTTGTATAGC
TGAGGTCTGC ATCTTGGTGA TT
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| Protein sequence | MANIKNLDKS GGIPDYEDLD LAFDDLLESE NDPTIFRKPT PSSIENDGEL TGSKQRKDSL
PDESSHDYIL GTLVVRVVAA RDLEPASKHS LGKMIFGGAH HSRNKGSANP YASVRFGSTT
QRTSEVFDTV NPIWPRSETM YMDVSHPRIP DHATQQPKSG TVPSIVATTE SSTQIYEQPG
NPPQKPKAST SLATHSIFEK EQVESMLEMN EAKDLYKPSR PILTVAIFHA NEIGTLKKYN
PSKGDSDDLF LGMVAIDLTP VLTGKTTIFD QWLPLTGTES TRTTVRIVCE YEASDTAPQS
LDWVHFTRFC DPADFYPAHG DRLYKVESCD GDNVTLSWTS SEGWVSSFVV HRNMLVCAAR
HQGPIEFYQD EIQSIAERLG HSPMVDTVQE TLRTLPDEGL VSVSVDIFRG GTSLLNRWLD
QGVRTIIDDI KFATNIDGRH NPNFEDSLAT DTLDEASDSI SQAAFARHSV EKSEVESAMG
TNLQPLPNMP ACPITGEPMI DPVVAADGHT YERFAIARWL HESDKSPLTG SILPHKSLVP
NYMLVSSLQE CAVISVEEDL PVGNDDGPLV EVVRDV
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