| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41234 |
|---|
| Symbol | |
|---|
| ID | 7199059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | + |
|---|
| Start bp | 266941 |
|---|
| End bp | 267972 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185162 |
|---|
| Protein GI | 219129997 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.570521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC CCCGACGCTC GAGCGAGAAG AAAAGTTCGA AAACTGTCCT TGCAGAAGAT
GGGATCTCGG ACAATAATAT AGTGTCACGC TCGGCTGAGG AAGTTAAGGA ACCACAACCG
CCACTTCCGT CGATAACAAA GACCATCGAT GACGAACGTC GCATAACTCC ACGTGAAGTG
CGGCGAAAAC GCCGAGAAGA GCTTCGATCC AAATCTACTG GTGTAGGCTT ATCAATCGAC
GCAAACGATA GCAAAATCGT AAATCGAAAA ATTGTCTTCG GGGATTTGGA CGATGAATTG
CCAGACAGCG TTGAGAAACC TGTTGAAGTT TCTGTTGCTC TGGAACCTTC CAAGAATGCG
AGTGCTGTGG TGGCAGCTAC GCACGACGAG AAAGACGCGG AAAGTGACGA TAACAAAGTA
GAAGAAATGA AGAGCAACGT GGCGAAAGCA ATTGAAATTG AAGAGCGCAA TCGTGAAAGG
GCGACAGCGC GACATGCTGC TGCCGTTCAG AAACCCAAAC GTAAGCGCAG AAAGGAAGTA
TCGCAGGTCC ACGCATCTGA CAATAGTGAA AATTTTGACG AATCTTTTTT CGCCGAGCTG
GACGAGAAAA GAGAAGAAGA TAGACAAAGT CGAAAGAAGG CGAAGGAAGA ATTACCGAAA
GGTCGTCACA TCACATTTGT CGTTTCAGGC GACGAGCCGG AGGCACGCAA ACCCTATCCT
GCTGCACATA ACATAGAAGT TGTTGTGCTA AACGACAACG ATAGCGGCCT CAAGAGTCCT
ATACCTGATT CTCCCACAAA ATCCGAATCA GGGACGTTAC TTTTGTACTC ACGGAGTGTT
CTTGCTGACG GATCAGATGG AATTTCGGCC AAACAATTAC AGAAGGCTAA AAAGTCGGGT
CGTAAAGATG CCGGGAATAT CCACTGGAAG CGCTCCAGAA AAATGAATCG ACTGCTTGTT
CCAGGTGCTC GATCCCAAAA AGCTCGCTTG ATGGGCGGGC GACCGGCTGC TCATTTTGTT
GTAGAAATGT AA
|
|---|
| Protein sequence | MAKPRRSSEK KSSKTVLAED GISDNNIVSR SAEEVKEPQP PLPSITKTID DERRITPREV
RRKRREELRS KSTGVGLSID ANDSKIVNRK IVFGDLDDEL PDSVEKPVEV SVALEPSKNA
SAVVAATHDE KDAESDDNKV EEMKSNVAKA IEIEERNRER ATARHAAAVQ KPKRKRRKEV
SQVHASDNSE NFDESFFAEL DEKREEDRQS RKKAKEELPK GRHITFVVSG DEPEARKPYP
AAHNIEVVVL NDNDSGLKSP IPDSPTKSES GTLLLYSRSV LADGSDGISA KQLQKAKKSG
RKDAGNIHWK RSRKMNRLLV PGARSQKARL MGGRPAAHFV VEM
|
|---|
| |