Gene PHATRDRAFT_41210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41210 
Symbol 
ID7199046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand+ 
Start bp205147 
End bp205854 
Gene Length708 bp 
Protein Length235 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185149 
Protein GI219129970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.273294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTG ACTGTGAGCC GGACACCGCT ACGGAGGCAC ACAATGTCGT GCCTGCCGGG 
GAGTCCCCTC CACTCGCGCC ACCGGAAGCA AACACTCCCA CGGCTTCCGC GACCCGCCGG 
AACCAACGTC TCCGTCAACT GAAACAACGA ATGAACCAGG CACGGCAACT CAATCAACAG 
GCTGTCCAAT CGGAAGGACA GCATCTGGGA TCGAACGGAG TTGCCGAGTC GCAACGCGTC 
ACGGCGGTTC CGGAACAAGC GGTGGACGCG GTACGCCGGG CGGAAGCCCA GGCCGCCACG 
GCGGAACGCC AACGCTTTCA CGTCAACGAT TACCACAATC CGCAAGGGCA ACATCGCAAT 
TACGAACGCA GTTTGCGGAG TTTGCCGTCC GCTCACCGAG GGAATGTGGG TGTGGACGTG 
CCGTTGTCGA CGACGACGAC GACCTACGAT CCACTCGAGA CCGCCGTGGA CCATCCGGAA 
CGGGAACGAC TCGGTGCACA GCGACTCGCG AACGAACTGC AACGGCGGAT CGAAAAACGA 
CAAAAACGGG ACCGGAAACG CAAGGAAAAG GAAGACAACG CACCGGACGA TGAAGACGTC 
GGCTACATTA ACAAACGCAA CAAGCATTTC AACGAAAAAA TCAAACGCAA CTACGAACAA 
CACACGGCTG AAATACGACA AAACTTGGAG CGTGGGACCG CACTGTAG
 
Protein sequence
MQPDCEPDTA TEAHNVVPAG ESPPLAPPEA NTPTASATRR NQRLRQLKQR MNQARQLNQQ 
AVQSEGQHLG SNGVAESQRV TAVPEQAVDA VRRAEAQAAT AERQRFHVND YHNPQGQHRN 
YERSLRSLPS AHRGNVGVDV PLSTTTTTYD PLETAVDHPE RERLGAQRLA NELQRRIEKR 
QKRDRKRKEK EDNAPDDEDV GYINKRNKHF NEKIKRNYEQ HTAEIRQNLE RGTAL