| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41192 |
|---|
| Symbol | |
|---|
| ID | 7199118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | - |
|---|
| Start bp | 170223 |
|---|
| End bp | 170795 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185223 |
|---|
| Protein GI | 219130125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGT CGACTACTCC GGGAGCTCCA AACGGCAGCA CTATACCTAA TTCCAGAAAG
CAGACCGCCA AGCCTCCATT GTGCGCTACC AGATCTATCA ATCTACTGGA TCATTTTCTG
AACAATCTAA AGCCGGGCGA CGGGGATTCA CCAATGTCAA CTCCCAAAGA ATTGCAAACC
AGACAAGACG CAATATTGCG AGTGGCGGAT TTTCTCTTTG GAAGTACTTT GGACGGAGCA
CTTGCAATTC TGGATTCGCG CGAATCTCTC ATTACCAGAA TTTTATCCAC TTCATCCCGA
CGACTGATTT ATTTCTGCCG CGGCAAGAGT ACAGGAAAGA ACGAATCGCA GAACTACTTT
TGTATTTTGC CAGAAAAAGA GATGGCGTTT CCTTTTTATT TTTGTTCTTG TCGATCCTTC
TTCGAACGGA GTCGAGCATC CGTTGAAGCT CGACCATGTA AGCATTTGTT GGCTATCCTC
CTTTCCCATG CTCTACATGT CAAGCCTTTA CAAGTAGAAA CCACCTCGGA CGAAGACTTC
AGTAAGCTCG TCGTCAATCG CTTAGAAATG TAG
|
|---|
| Protein sequence | MDQSTTPGAP NGSTIPNSRK QTAKPPLCAT RSINLLDHFL NNLKPGDGDS PMSTPKELQT
RQDAILRVAD FLFGSTLDGA LAILDSRESL ITRILSTSSR RLIYFCRGKS TGKNESQNYF
CILPEKEMAF PFYFCSCRSF FERSRASVEA RPCKHLLAIL LSHALHVKPL QVETTSDEDF
SKLVVNRLEM
|
|---|
| |