| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41172 |
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| Symbol | |
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| ID | 7199028 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011696 |
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| Strand | + |
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| Start bp | 129840 |
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| End bp | 131182 |
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| Gene Length | 1343 bp |
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| Protein Length | 390 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | calreticulin |
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| Protein accession | XP_002185131 |
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| Protein GI | 219129933 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.407804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA CCTTGCTGAC CGTTCTGGCG GCTGCAGTTG CCGTTCCCGT CACTGCCGAA
GTTTATCTGA AGGAACAGTT CAACGACGAG GTAAGTCTTT GGGGGTACGC GATCGATGAC
CATGCCTTAG GGGTCGGGAC AAGATCCGGT CATCCGTATC GACGTTCCCA ACGGTCGTTA
TTTCCAACGA ATCCCTACTC TAGACCACAC CCGTTCCGTC TCTGACACTC GTACTCCTTC
TGCTGCTGTG ACATTGTCAG GCATGGACAT CCCGTTGGAC GGAATCCAAG GACTGGAAGC
CGGAAAGCGA TATGGGTACC TGGAAGCACA CCGCCGGTGA ATGGTACAGC GACGAAGCCG
ACAAGGGTAT TCAGACGTCG GTGGACGCTC GCTTTTTCGG CATTTCGGCA CCTCTCGATA
AACCGTACAC CTCTTCCAAA GACAAGGACT TGGTCATTCA ATACAGCGTC AAACACGAAC
AGGATTTGGA CTGCGGTGGG GCCTACATTA AGCTCTTGCC GGGCGGAAAG TCCTTCCAGC
CAGCGGCCTT TGGGGGTGAA TCACCCTACG CCGTCATGTT CGGACCGGAT ATTTGCGGAA
GCTCCAACAA GAAAACTCAC GTTATTCTGC ACTCCAACCA AAAGGACGAA AACTTGCTGA
TCAACAAGCA AGTCATGTGT GAATCCGATA GCGTTACCCA CCTGTATACT CTGGTGGTCC
GTCCCGACAA CACCTTTGAA GTCTTTGTGG ACAACAAGTC GGTTCGGAGT GGAAATCTGG
CGGACGAATT CGATTTCCTG GAGCCCAAAG AAATTAAGGA TCCCGACGCC CAAAAACCGG
AAGACTGGGT GGATAAGGCC AAGATCGCCG ACCCCGAAGA CAAAAAGCCG GAGGGCTACG
ACGACATCCC CCAAGAACTC CCCGACCCGG ACGCAGTCAA ACCGGACGAC TGGGACGACG
AGGATGATGG CGAGTGGGAA GCACCCATGA TTGATAATCC GGAATACAAG GGACCGTGGA
AGCCAAAGAT GATCGAGAAC CCGGACTACA AGGGACCTTG GGTTCATCCC ATGGTTCCCA
ACCCGGACTA CAAGGACGAC GACGAAATGT TCATGGTCTG CAAGGACACA TGCACACACG
TAGGATTCGA GCTCTGGCAA GTCAAAACTG GAACTCTGTT CGACGATATC ATTGTGACCG
ATAGCTTAGA AGAAGCACAC GCATTTGCGC AAGAAACCTT CTTTAAGAAG AAGGATGGAG
AGAAGGAAAT GTACGACAAG ATTCAAGCTG AACGACAGCC GGAGATGCCC GATATGGTAA
GTGGCGAGAC TCTTTCTTAC TGA
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| Protein sequence | MKFTLLTVLA AAVAVPVTAE VYLKEQFNDE AWTSRWTESK DWKPESDMGT WKHTAGEWYS
DEADKGIQTS VDARFFGISA PLDKPYTSSK DKDLVIQYSV KHEQDLDCGG AYIKLLPGGK
SFQPAAFGGE SPYAVMFGPD ICGSSNKKTH VILHSNQKDE NLLINKQVMC ESDSVTHLYT
LVVRPDNTFE VFVDNKSVRS GNLADEFDFL EPKEIKDPDA QKPEDWVDKA KIADPEDKKP
EGYDDIPQEL PDPDAVKPDD WDDEDDGEWE APMIDNPEYK GPWKPKMIEN PDYKGPWVHP
MVPNPDYKDD DEMFMVCKDT CTHVGFELWQ VKTGTLFDDI IVTDSLEEAH AFAQETFFKK
KDGEKEMYDK IQAERQPEMP DMVSGETLSY
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