| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41157 |
|---|
| Symbol | |
|---|
| ID | 7199021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | - |
|---|
| Start bp | 95637 |
|---|
| End bp | 96656 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185205 |
|---|
| Protein GI | 219130087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGT TGAATATCAA ATGCACCCTG CTGTGTCTCT GCGTAACACG GGTGTTGGGA
TTTTCACCAC AATTAATAAC CTGGACAGCA ACACTAGACC TGCAACAAAC GACATCCTTG
CGGTCGAAAG CCATCGAATC GGCCCTGTTC GTAACTCCAA GACGGGAAGG AGACAAGCTA
TCCAAATCGT CTCGCCTACG TAATTTTATA CATCGCTTCG ATACGATTTC CGCAGCTGGA
CTAGATCCCG AACAAGTTCA GATTGCTGGC TTGTTCGGTC GGATCAAGAA AATACACAAC
CCCAGAACGT ACTTAATACT GGCGGCTCTG GCTGGATTTC GATGGGACTG GTGCTTTCGC
AATCCCTACT ATTGGTTCGC GGTTGGGTTT TGCATTAAAT GGTACCGTGC TCGCTATGTG
TACAAGATTC CCGTGTGGGA TCGTCAGCCT AACTGGAACA ATATTATTAC CAGCAAAGAA
CAAGAAAAAG ATTTGAAAGC ATTCACCTGC AAAAAATGTG GGTCCACTAT TTTTATTGCC
AAAACCAGGG AATTCTTTTT CGAGGGGAAC ACGGGCATCG GCGGTTTGGG TTGTTTTTCG
TGTGGCGCCA AGGGCAAGGA AAATTTTGTG ATGGATCGCG ATCGGATTTT GGAGGATGTC
GCCGATGAGG ATGATTACTT TGAGTACGAG AGACCGCTGG ATTTTGTCTC GCGTGCGGAA
CGACGGAAAA TCCTGAAAGA AGCGCAAGGA GACGAAGAAA AAGCGAACGA ACTGTTGGTG
AAACGTTCAG CATCGGATAC GATTAACGAC GAAGTACCGG CAACGAGCAG CTCGTCGTCG
GACGTTGTGG ACACGAACGC TTCAGCGGAG GAGAGCAACT CGAACATTAC AGAAGTAGAA
ACGCCAAAAA AGCGAAAGAA AAACAAAAAG CATAAGAAGG ACTCGAAACC GAAAGAGAGC
GAAAAGCAAC CAGATCTTTC GGACGACGAT TTAGACTTTC TGGATATGGA CAGTTTGTAG
|
|---|
| Protein sequence | MNSLNIKCTL LCLCVTRVLG FSPQLITWTA TLDLQQTTSL RSKAIESALF VTPRREGDKL
SKSSRLRNFI HRFDTISAAG LDPEQVQIAG LFGRIKKIHN PRTYLILAAL AGFRWDWCFR
NPYYWFAVGF CIKWYRARYV YKIPVWDRQP NWNNIITSKE QEKDLKAFTC KKCGSTIFIA
KTREFFFEGN TGIGGLGCFS CGAKGKENFV MDRDRILEDV ADEDDYFEYE RPLDFVSRAE
RRKILKEAQG DEEKANELLV KRSASDTIND EVPATSSSSS DVVDTNASAE ESNSNITEVE
TPKKRKKNKK HKKDSKPKES EKQPDLSDDD LDFLDMDSL
|
|---|
| |