Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41156 |
Symbol | |
ID | 7199099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 94150 |
End bp | 95301 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185204 |
Protein GI | 219130085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCTT CTGCAGGAAA CCCACTCAAG TCTGATGATG ATCTTAAGCT GATGCTAGAG AAGCTCGAAT TCATCAAGAC TGCAAAAATC TTCAGGCGTT GGAGGGGATC ATTTCTCAAC CGCTTCGAAA TATTCTTAGA AGAAGACAAT ATAGTGAACG CCCAAGGGGC ATACGAACAG TTTTCTCATA GCATGGAGGC ATTCGCAAAT CAGGTAAAGA AAGTTGAAGC GTACATAGAA AGCGGAGACC TTACAGCGGA CCGTTATTTT TCTTCCGTCA AGGCAAGAAA CTGCCTGAAT GAAATGTCTA AAATGATGGC TTCGGTTATA GAAGAAAAAG ATGCCTTGAT TCCTTCTACA GTCTCAATGG AAAATGACAG CGGCTACAAC AAGTTTCATA TGGGAGCTGT TCTCATTCGT GACAATTTCG AAGAATATGG CCGACTGACA TATTACGGAG AAAGCTTGCA GCACATGAGA AAGGTAACCC TGGCCGAGAT TATTGACAAG CAAATTTTAG AGCAGATGGA CAACTATGGA GCGAAGCTCA AAAAATTTTG CGATGTAATG GCAGATCTTG GCCTTTACGA AGTCATGCTA AAATGCCGTG AGTTTGCTTG TGTCGAGGAT AACAAGGATG ATCTTATATT CCTCGACCTG AAAACTGGTG GAATCGGCGA ATTGGATCGA GCCGCCTGTC TCGGAAAACG TGTAATCACG TCTACTCACA AAGATCAGGA AGGTAACGAG ATTTTCGAAG AATCCGTCTT AGACGACGAT GGCAAAGCAA AGCTTCTCAA AATGATACGC CAGAATCCGA GGCTAGGACT AGGTTTTGGA AACAGCTTGA ACTCCTTCCA GGAAGAGAGT CTCGCTACTG AAAATGCAGA AGTTATAAGA AGTATGTGGG GTGTGACATT GCGAAAGACA CCGAGAAACA AGAAAGGAGA GGAGTTCATC TTTCTCTGTC AGAAAACCGG TGTTTTCGGA GAACTTTCAC GCAAAACGTG TTTAGAGGTG GCGATCATTA CCGAAGTGAA GGACGAAAAT GGAGAAGCCA AAGTTTGCGA GTCACAGCTT GAGTTTGACG AAAGAGCGTC GCTCTTAGAG CAGATCCGAT CTCTTCTTGA TTTGGGAGTG CTGGAACAGT GA
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Protein sequence | MVSSAGNPLK SDDDLKLMLE KLEFIKTAKI FRRWRGSFLN RFEIFLEEDN IVNAQGAYEQ FSHSMEAFAN QVKKVEAYIE SGDLTADRYF SSVKARNCLN EMSKMMASVI EEKDALIPST VSMENDSGYN KFHMGAVLIR DNFEEYGRLT YYGESLQHMR KVTLAEIIDK QILEQMDNYG AKLKKFCDVM ADLGLYEVML KCREFACVED NKDDLIFLDL KTGGIGELDR AACLGKRVIT STHKDQEGNE IFEESVLDDD GKAKLLKMIR QNPRLGLGFG NSLNSFQEES LATENAEVIR SMWGVTLRKT PRNKKGEEFI FLCQKTGVFG ELSRKTCLEV AIITEVKDEN GEAKVCESQL EFDERASLLE QIRSLLDLGV LEQ
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