Gene PHATRDRAFT_41130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41130 
Symbol 
ID7199089 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp38555 
End bp39562 
Gene Length1008 bp 
Protein Length304 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185108 
Protein GI219129885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.156284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTA CCGAGAATGA TGGACCAAAA GCAGCTCGCG ACTCTCCTCG AGGGCGAACA 
ACAATAAAAC TTGTTATTGG TCTTTTGTTA CTTGGCTTTG TTGCCTTTGT CATCCTTGAT
TCACTAACAA ACAGATACGT GCGTGACGGA ATCGATTCAT TCCTCGACTG GATTGAGGAG
AATTCCGTTG AAGGAATCTT CCTTTTTGTG CTCGGTGCGT ATGTATTGCG CGCTATTAGC
AAGCTGCCTC TTGAAATATC ACACATGGTC CAGGAAATGA TCTCACTATG TCTTTTTGAC
TTTTTAGTTT ACTTCGCTGC AACAATTTTG TTTATTCCCG GCTCAATTTT AACGCTTGGT
GCTGGTTTCG TTTTCGCATC CTCCTTTGGC CTTGGACTGG GACTTGTTAT TGGAGTGTTT
GCTGTTTTTC TTGGAGCAAG CTTGGGCGCC ACTGCATCTT TCTTTATTGG ACGTTACTTG
CTCCGGGACC AAGCAACAAA GCTGACGAAG AAGTACGCAG TTTTCGAGGC CTTGGACGTC
GCTCTTCAAG AAAACGGCTT GAAGATTTTG GTCCTGCTTA GATTGTCTCC AATTGTTCCT
TTCAATGCTA TCAACTACAT ATGCGGTGTA ACGGCTGTAT CAATTCGCGA TTACATCCTG
GCACTGTTTG CTATTTTACC TGGTACAACC TTGTACGTGT TTCTCGGCGC TTCAGCTGGA
AGTCTTAGTG ATAGTGCTTC AAGTGGCGAC GACTCTACTG TTACAATCAC TGTAGTAGTC
CTCGGAATTG TCTTGGGTTT TATTGCCATT TGGATTTCAG CACGTTACGC GAGAAAGGAA
CTGAACAGGG TTCTTGAACA AAGACGTGCA GAATCTGAGC AGTCCGAGGA AACAGCTGAG
AGTAATATTG AACAAGGTGT GGTGAATCAT CCTCGAGATA GAGATTTGGA CTGTTCTGAG
TGTGAACAAG TTGGGGATGT CGGACCAGTG GAACTGTCGA TCAAATGA
 
Protein sequence
MSTTENDGPK AARDSPRGRT TIKLVIGLLL LGFVAFVILD SLTNRYVRDG IDSFLDWIEE 
NSVEGIFLFV LVYFAATILF IPGSILTLGA GFVFASSFGL GLGLVIGVFA VFLGASLGAT
ASFFIGRYLL RDQATKLTKK YAVFEALDVA LQENGLKILV LLRLSPIVPF NAINYICGVT
AVSIRDYILA LFAILPGTTL YVFLGASAGS LSDSASSGDD STVTITVVVL GIVLGFIAIW
ISARYARKEL NRVLEQRRAE SEQSEETAES NIEQGVVNHP RDRDLDCSEC EQVGDVGPVE
LSIK