Gene PHATRDRAFT_41117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41117 
Symbol 
ID7198998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp6326 
End bp6787 
Gene Length462 bp 
Protein Length153 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185103 
Protein GI219129874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.032519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCTT ATGGGCTACC CAGAGCACCA CTCAAAAGAC ACGTACCATT TTCTGAACAT 
CGCGACTCAG GCGCCAATCC TAAGCCGCGA CATCCATTGG GACATTACCA TGGTGGGATC
AAGCCCACAG ACAATACAAA GGATCTTTTC GAATCCGACG AAGACGACGA AATTCAAGTC
CCGGATGCCT ACACGAAAGT TGTCGCCCTG CCTCAAGCGG GGAGGAACAC CAACACGGCA
AAATCTCCGG AGACCACGGG AATTTCAAAG CAAAACGTGT TTAGTCCTCT TCAGACACGC
GGTCAGCGGA AGTTTGCCAA GGAAGCGTGT TTGATGCCGG ACAATGATTC CAACAACCCA
GATAAGGAAG AAGTCAATAT GTCTGAGGAA ACGGAAATCC ATGAGCATCA GGCATTTAAC
GTAATGACTG GGAACTCAGA CCCAGGAGCA GATGTTCCCT AG
 
Protein sequence
MHAYGLPRAP LKRHVPFSEH RDSGANPKPR HPLGHYHGGI KPTDNTKDLF ESDEDDEIQV 
PDAYTKVVAL PQAGRNTNTA KSPETTGISK QNVFSPLQTR GQRKFAKEAC LMPDNDSNNP
DKEEVNMSEE TEIHEHQAFN VMTGNSDPGA DVP