Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31073 |
Symbol | |
ID | 7199058 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 264489 |
End bp | 265346 |
Gene Length | 858 bp |
Protein Length | 188 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185161 |
Protein GI | 219129995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.126117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCTCTCTAC CGTCGGACGC TTGCAACAAG GTTCTACACT CATCCTTTCC CGGACCAGTA CGTGCACAAA AGTCCCGCCA TGAGTGCCCA GAAGATCCGA AAGAGCGCTG GTGTGAGTTA ACAGTGTGTC GTAGTTTAGC GTAGTCTAGT TTGGAACGAA AGCACGCTAT GGACGGGCTT TTCCGAGTCT GTCGCGTAAC TCGGATGGCT TGGCGCAATG GTCGTGCTAT CGGGGACTCA TTTAGCAGGG CAATCGTCTG ACACGGCTTC TTTTATTTTC TTATAGGCTG AACCCGATGA ATTCGAGGCT TCTGTTGCCC AGGAGCTTCT CAACCTTGAG ATGACTTCCC CTGACCTCAA GGCCTCCCTT CGGGATCTTT ACATTACGGC CGCTAAGGAA GTGGATGTCG GCAACGGCCG AAAGGCTATC ATTCTGTACG TCCCTTACAA ACTACGAAAA TCCTTCAACA AGGTTCACCA GAGACTTGTG CGCGAGCTTG AAAAGAAGTT TTCGGGACGC CACGTTATGA TTATTGCTCA GCGCACCATT CTGGGAAAAT CCTTTCGCCG CAACCAAAAA ACCAGCGGTC CTCTTCCGCG CTCGCGCACA TTGACCGCCG TTCAGGACGC CATTTTGGAA GACATTGTCT ATCCTACCGA AATTACAGGC AAGCGAACCC GGGTCAAGGT TGACGGCAAG CGTGTGTTGA AGGTTTTCCT GGACAGCAAG GACCAGGTTG ACGTTGAGGG ACGAACGGAC ACGTTTGCCG CTGTCTACGG AAAACTGACC AACAAACAAG TCTCTTTTTA CTTCCAGTAA ATAGCTAAAC AGTTATAAAT AAAAGGAGTG CAAAGCTG
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Protein sequence | MSAQKIRKSA GAEPDEFEAS VAQELLNLEM TSPDLKASLR DLYITAAKEV DVGNGRKAII LYVPYKLRKS FNKVHQRLVR ELEKKFSGRH VMIIAQRTIL GKSFRRNQKT SGPLPRSRTL TAVQDAILED IVYPTEITGK RTRVKVDGKR VLKVFLDSKD QVDVEGRTDT FAAVYGKLTN KQVSFYFQ
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