Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_2819 |
Symbol | |
ID | 7198967 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 235005 |
End bp | 235901 |
Gene Length | 897 bp |
Protein Length | 270 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185154 |
Protein GI | 219129981 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.212535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATATCCGCAG CCGTCCAGCA TTTATGGAAC TTGGACGATA ACCGTCTTGA CCCTGAAGCC GACTATACAA TGAATGTTCA AAGCGTAAGT TTTAATCTCA GCACTGTTTT GTGCTTTTCA GTCGTTCTTT TCTGCTTGAA CGCTCACCTA CGAATCTTAA ACTGATTGCA GGGCAAGAAA CCGTTTTGGA AAGAAGATGG CGCAAATGAT CCCCTCTTTT CGGCTGTCGA TCGTGCCTGC TTTCAACGCC CGACATACGC AGCGTTCATC GCCTTGCTGG ACAACTATTC GGCCGAGACC GGAGTCGCAG AAGTTGTGTC GGACGCGGAA CGTAGTGAAG TGTCAACTTT CTTGAACGCT GTCATGGAGA CGAAACCGAT GCAGTTCTGC CACCAGTATT GTCGTGCTAA AGACCCAGAC GGTGTTCCCT CCAGTTCTCA AGAGTTCAAG GGCCTTCTCA AGAAGATTTG GTTTGATCTC TACCGTCGTG AACAGACTGG TGATTCGTCT GGATTCGAGC ACGTTTTTGT GGGCGAAGTC AAGAACGGTG AAGTTAGCGG ATTCCATAAT TGGATCCAGT TCTATTTGGA AGAACAAAAG GGTGGATTGG ACTACCGTGG CTACATCAAA CCTCGTAGTC AGACCGATGC GTTGGCGGAT GCGAACGACT ACTTGCTCAG CTTGCAGTTT TCGTGGCACG GGGTAGAAAA GTTTGTTAGC ACGAGCTTCA TTGGTGTTAG CCCCGAATTT GAGCTTGCCC TTTACACCAT GTGCTTTTTG GTTGGAGAAG AGGAGAACGA TGTCGAACTC AACACAGGCG GAGCCGAGAA CGATGCCTAT GGGCTCAAGA TCAAATGCTA CAAGATTGCC CGGGATAAGG TCGGGACAAG CTTCCCC
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Protein sequence | ISAAVQHLWN LDDNRLDPEA DYTMNVQSGK KPFWKEDGAN DPLFSAVDRA CFQRPTYAAF IALLDNYSAE TGVAEVVSDA ERSEVSTFLN AVMETKPMQF CHQYCRAKDP DGVPSSSQEF KGLLKKIWFD LYRREQTGDS SGFEHVFVGE VKNGEVSGFH NWIQFYLEEQ KGGLDYRGYI KPRSQTDALA DANDYLLSLQ FSWHGVEKFV STSFIGVSPE FELALYTMCF LVGEEENDVE LNTGGAENDA YGLKIKCYKI ARDKVGTSFP
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