Gene PHATRDRAFT_23924 details

Gene Information

• Locus tag: PHATRDRAFT_23924
• Symbol: GPI_1
• ID: 7199044
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011696
• Strand: +
• Start bp: 194949
• End bp: 197014
• Gene Length: 2066 bp
• Protein Length: 554 aa
• GC content: 47%
• Product: isomerase glucose-6-phosphate isomerase
• Protein accession: XP_002185147
• Protein GI: 219129966

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCAGCCTTG CAAGCTCTTT TTACCCGACT GACTGAAAGA TACCCACAAG GAGAATCTTG 
TTCAATCCTC TCCTTGCAAG TCCTTTACAC TTCTCCAAGC CTATCCTACC ATGTCGGACC 
TGACGTCTTC TCCCGCTTGG AAAGCCCTTG AGGCCCATTA CGGTACCATG AAGAACGTTC 
ACATGAAGGA ACTATTCGCC AACGATTCCG AACGCTTTCA CAAGTATTCC ATGAAGTTCG 
AAGACATTCT ACTCGACTAC TCCAAAAATC GTGTTGCAGA TTCGACTATG GATCTGCTGT 
ACGCTTTGGC GGAGCAGCAA GATGTCAAGG GTAAGGCTCA GGCCATGTTC AGTGGTGAAA 
AGATTAACTC CACGGAAGAC CGGACTGTCC TGCACATTGC TTTACGCAAC CAGTCCAACA 
AGCCGATCTA CGTCGATGGT GAAGACGTCA TGCCCGCTGT CAACGAAACC CTCGAAAGGA 
TTAAAGCTTT TACGAATCAG GTTCGTGACG GGACCTGGAA AGGGCATACG GGAAAAGTGA 
TTACGGCGAT TGTCAATATC GGTATCGGTG GATCCGATCT TGGTCCCGTC ATGGCCTGTG 
AAGCTCTCAA GCCGTACGCA GCCGACCATT TGAAGATGCA CTTTTGTTCT AACGTAGACG 
GTACGCACAT TGCCGAGATT CTTAAGCTTT GTGATCCCGA AACAACCCTA TTCTTGATCG 
CCAGTAAAAC CTTCACCACG CAAGAAACCA TGACCAACGC CAACACAGCG AAAACGTGGT 
TGGTGGGCAA CTTTGATGGG GACGAGACTT CTGTCGCCAA ACATTTTGCG GCGTTGAGTA 
CTAATGGTGA TGCTGTGTCT GCCTTCGGTA TCGACGTCAC TAATATGTTT GGATTCTGGA 
ATTGGGTTGG CGGACGATAC AGTTTGTGGA GTGCGATCGG GACACCGATC GCCCTCGCTA 
TTGGTTTCGA CAATTGGATG GAAATGCACG CGGGTGCACA CGCTGTCGAT CAACACTTTT 
TGCAGTACGA TGGCAAGGAC AATCTGCCTT TGACTTTGGC GTTGATTGGT CTATGGTACA 
ACAAGTAAGC TCTGCGAATG ATCTGATGAA TATTTTGTTT TGGTACTGAC TGTGAGACTG 
ACTTCTTTTA TATGAACAGC TTCTTTGGCG CTGAAACTGT GGCAATTCTC CCCTACGATC 
AATACATGCA CCGATTTGCA GCTTACTTTC AGCAAGGCGA CATGGAATCG AACGGGAAGT 
ACGTTGATAT GAACGGCAAA AGGATGCAAA CCCAAACCGG TCCCATCATA TGTAAGTGTA 
TATGATCTTA TGAGTGTGCG ATCAGTTCAG AGCTAGCCTA ACCCTCATTT TTGTCATCAT 
ACAGTCGGTG AACCTGGCAC CAACGGACAA CACGCTTTCT ATCAGTTGAT CCATCAAGGC 
ACCAAAATTA TTCCTTGCGA TTTCGTTGCA CCTTGTCAAA GTCAAAACAA TTTGCCCGAG 
AAGCTTGGTG CGCCTGTTGA CCACCATCCT ATTTTACTTT CCAACTACTT TGCTCAAACG 
GAGGCTCTAG CATTTGGAAA GGATGAAAGC CAAGTTAAGG CGGAATTGGA TAAGACGGAC 
ATGTCGGAGG CCGAAAAGAC GGCGCTTGTC CCGCACAAGG TTTTCGAAGG CAACCGCCCT 
TCGAATTCTT TCCTGTTCAA GAAGTTGACG CCGCGTACGT TGGGTAGTCT GATCGCAATT 
TACGAAATGA AAATATTCTG TCAAGGCGCT ATTTGGAATA TTAACTCGTT TGATCAGTGG 
GGTGTTGAGC TCGGTAAGCA GCTTGCCAAG GCTATTTTAC CGGAACTCGA CGGCGACTCC 
CCTGTTTCGT CCCACGACAG TTCCACCAAT GGTCTCATCA ACTATTACAA GACAAACAAA 
TGAACTGTAG AGCATTCGAG CTGGGACGTC TGGCGTGTTA AGATGCAACA AAATAAACGA 
TGTGAAGTAG GAAGCGATTC CAATGACGCA TGAAAGTTGT AGCTCTGCGT TATATCCATT 
TAATTTAGCA AATCCAATCG TAAATA 

 

Protein sequence

MSDLTSSPAW KALEAHYGTM KNVHMKELFA NDSERFHKYS MKFEDILLDY SKNRVADSTM 
DLLYALAEQQ DVKGKAQAMF SGEKINSTED RTVLHIALRN QSNKPIYVDG EDVMPAVNET 
LERIKAFTNQ VRDGTWKGHT GKVITAIVNI GIGGSDLGPV MACEALKPYA ADHLKMHFCS 
NVDGTHIAEI LKLCDPETTL FLIASKTFTT QETMTNANTA KTWLVGNFDG DETSVAKHFA 
ALSTNGDAVS AFGIDVTNMF GFWNWVGGRY SLWSAIGTPI ALAIGFDNWM EMHAGAHAVD 
QHFLQYDGKD NLPLTLALIG LWYNNFFGAE TVAILPYDQY MHRFAAYFQQ GDMESNGKYV 
DMNGKRMQTQ TGPIIFGEPG TNGQHAFYQL IHQGTKIIPC DFVAPCQSQN NLPEKLGAPV 
DHHPILLSNY FAQTEALAFG KDESQVKAEL DKTDMSEAEK TALVPHKVFE GNRPSNSFLF 
KKLTPRTLGS LIAIYEMKIF CQGAIWNINS FDQWGVELGK QLAKAILPEL DGDSPVSSHD 
SSTNGLINYY KTNK