Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16786 |
Symbol | |
ID | 7198971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 254544 |
End bp | 256691 |
Gene Length | 2148 bp |
Protein Length | 716 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185158 |
Protein GI | 219129989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCCCC CGGAGGGCGC CGAAAAGTAT GCCTTTGAAG CGGAAGTGCA CCGTATGATG GATATTGTCG TCAATTCTCT CTACCAAAAC AAAGACGTCT TTCTGCGTGA ACTCATCTCC AACGCCAGCG ACGCACTCGA CAAGTTTCGT TACCTCGCTC TCACGGAACC GGACACGTAC AAGGGTGAAG AAGAGATTCC TCTCCAAGTC AAGATCCAGT ACGATGCCGA CGAACACACT CTGACTATTC GGGATACCGG CGTCGGTATG ACTCACGACG AAATGGTGGA GAATCTCGGA ACCGTCGCTC GATCGGGAAC GACCAAATTC ATTCAGTCGC TCAAGGAAAG CGGCAACGAC GATTCCGCCA TGTCCCAGAT TGGTCAGTTC GGTGTCGGTT TCTATTCCAC CTTTTTGGTA GCCGATCGCG TCACAGTGGC TTCCAAAAAT CCACGCGATG ACGCCCAACA CGTCTGGGAG AGTGAGAATG CATCGTCCAG TTTTGTGGTG TACCCGGATC CCCGTGGCAA CACGTTGGGC CGGGGGACCG AAATTACGCT CCATCTCAAG GAAGACTCGT TGGAATACGC CGACCCAAAT CGTCTCCGTG AACTTGCCCA ACACTATTCC GAATTTGTCA TGCATCCCAT TTCGTTGCGA ACGACCAGTA CCATGGAGGT CGAGATCGAA GACGAAGAGG AGGAAGCCAC GCCCGAAACG ACCGAGGAGG CCAAGGAGAC CAAAGGAGAT GACGGCGACG ACGAAATTGA AGTCGGTGAC GACGAGTCCG AAACGGAAGA GAAGCCGAAA AAGACCAAAG AAGTTACAAC GCACTCTTGG GACGTTCTCA ACACTAACCA AGCTATTTGG ACACGTGAAA AGGAAGATAT TTCGGACGAC GAATACCAAG CCTTTTGGCA AGTTCTGGCA CACGAGGCCA CCAGCAACGC TACCTCCTGG TCCCACTTCA ACGCCGAAGG AAACATCAAT TTTAAGTCAA TTCTCTACTT ACCCGACGAC CTTCCCCCCA CGTATTCGTA CACCAACATG GAACCCGTGC AAGGGGCTCT GAGGCTGTAC GTGCGTAAGG TATTGATCGG GGACGAGTTT AACTTGCTTC CCAAGTACCT GGGTTTTATT CGGGGCGTGG TCGATTCGGA TGACTTGCCT TTGAACGTCA ATCGCGAAAC GCTGCAAGAA AGCAAGATTC TATCTGTGAT CAAGAAAAAG TTGGTGCGCA AGGCCATCGA GATGATACGC CAATTGGCCA AGGACAGTGA AGACGAAGGT CAGTCCGAAG CGGAAATTGA CGAAGAAGGA AACGTCATTG AAACAGAAGA AAAGGACTCT AGATACATTG CATTTTACCG CAAGTTCTCT CCAAACATCA AGCTGGGTGT AGTTGAGGAC GAACCGAACC GCGGAAAGTT GATGAAGTTG CTCCGTTTCC AGACTTCCAA ATCAGATGGT AAGATGATTT CGCTGGCTGC GTATTTCGAC AACATGAAAG AGTGGCAAGA GGAAATCTAC ATTTTGGGTG GTGCTTCGGC TGAAGAGATT GAGAAGTCAC CGTTTTTGGA GACATTCCGT GACAAAGACG TGGAAGTCAT ATATCTAACC GACTCTATCG ACGAGTACAT GCTCCGCCAA GTTCGCGATC ACGAGAAGAA AAAATTTGTG CAGATCTCGA GTGAAAGCGT CAAGTTCAAG GACGAAGATG AAGACTTGAT TAAACGCCGC GAGAAGGCCT ACAAGAACAC ATTTAAGCCT TTGACGAAGT GGTTGCGAAA GCTATACACT GGCTCCATTC TTCGAGTGCA GGTGGCCCGC CGTAGTCTCG GATCGGTACC CGCCATTGTT ACTAGCTCAG ATTTCGGAAA CTCGGCAAAT ATGGAGCGGA TTCTTCGCGC CCAGGCTTTC CAGCACGGCA TGGACCAGTC GTCGTTTTTG GCGTTGAAGG TCTTTGAATT GAACCCTCGC CATCCGCTTG TGAAAAAGTT ATTGGACGGA TGTCCACCGG AAGAAGAGGG CGACGAACCC TTCGAAGTGG CTCCGGATAT CCTGGATGCT GCATGGATGC TTCACGATAT GGCAATGCTC AATGGCGGCT TCCCGATCAG TGACCCAGAG GCACACAACC AGCGCCTC
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Protein sequence | MVPPEGAEKY AFEAEVHRMM DIVVNSLYQN KDVFLRELIS NASDALDKFR YLALTEPDTY KGEEEIPLQV KIQYDADEHT LTIRDTGVGM THDEMVENLG TVARSGTTKF IQSLKESGND DSAMSQIGQF GVGFYSTFLV ADRVTVASKN PRDDAQHVWE SENASSSFVV YPDPRGNTLG RGTEITLHLK EDSLEYADPN RLRELAQHYS EFVMHPISLR TTSTMEVEIE DEEEEATPET TEEAKETKGD DGDDEIEVGD DESETEEKPK KTKEVTTHSW DVLNTNQAIW TREKEDISDD EYQAFWQVLA HEATSNATSW SHFNAEGNIN FKSILYLPDD LPPTYSYTNM EPVQGALRLY VRKVLIGDEF NLLPKYLGFI RGVVDSDDLP LNVNRETLQE SKILSVIKKK LVRKAIEMIR QLAKDSEDEG QSEAEIDEEG NVIETEEKDS RYIAFYRKFS PNIKLGVVED EPNRGKLMKL LRFQTSKSDG KMISLAAYFD NMKEWQEEIY ILGGASAEEI EKSPFLETFR DKDVEVIYLT DSIDEYMLRQ VRDHEKKKFV QISSESVKFK DEDEDLIKRR EKAYKNTFKP LTKWLRKLYT GSILRVQVAR RSLGSVPAIV TSSDFGNSAN MERILRAQAF QHGMDQSSFL ALKVFELNPR HPLVKKLLDG CPPEEEGDEP FEVAPDILDA AWMLHDMAML NGGFPISDPE AHNQRL
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