Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16669 |
Symbol | |
ID | 7198994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 359507 |
End bp | 360298 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185265 |
Protein GI | 219130213 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTTCGATTGT TTCGAGTTAG GCCATTCAAG GTAAAAGTTG ATTACACTCC TCAGAAAGTC GATCGAAAAG CTCTGAAAGA CGGAGCGTTC GTCGAACTTG TCAATTTGAG CCCCATCGAT GCACTGATAT TGACTCTAAA AAAGGTCGAA ATAGAAGGAA AGACAGGCTT TGGCGAAGTC CTTCCCATCC TGATCCAAAG CTGGATTCAA GAAATATGTA GTACACAGCT CCTCAAGTTT GTCACGAACA TGAGACCCTT GGAACCCATT ACGCAGGTTG GAGAGACAGC TGTGGATATG ATTGTTTTAC CTTGGGAAGC CTTTCGGAAC GGTGATAGTG TGCAAAAGGC AATCCGATCG GGAACAACAA GCTTTGCTTC GACGCTAGTG TATGAAGCTT TTACAGCAAC ATCGCGAGTT GCTGGGTACG TAGCGGATCA AGTAGGTCGC CTTGGACGAG AGGAGTTTGA CCGGTCCAAC CAGCCATCTC GTCCTCTTGA AGCACCCCGT CGTGCCACCG ATGCGGCGCC ACACGCTCTG CAGAGTGTCA CTCGTGGGTT ACAAGAAGCA AACTACAAGA TTGTTATCAT TCCGTACCGT GAGTACCAGA GAACCGGAGC CCGTGGTGCG ATTAGGAGCG TAGTAAAGGG CATTCCGGTG GCGATTGGTG CCCCCACAAG TGCAGCAGCC GAAGCCATAT CCTACGCCTT GCTCGGAGCT CGCAATCAGA TTCGGCCTGA TATCCGAAAA GAGGAAGAAT CGAGCCAACG TGGTATGCAT CTAGATCGTT AA
|
Protein sequence | FRLFRVRPFK VKVDYTPQKV DRKALKDGAF VELVNLSPID ALILTLKKVE IEGKTGFGEV LPILIQSWIQ EICSTQLLKF VTNMRPLEPI TQVGETAVDM IVLPWEAFRN GDSVQKAIRS GTTSFASTLV YEAFTATSRV AGYVADQVGR LGREEFDRSN QPSRPLEAPR RATDAAPHAL QSVTRGLQEA NYKIVIIPYR EYQRTGARGA IRSVVKGIPV AIGAPTSAAA EAISYALLGA RNQIRPDIRK EEESSQRGMH LDR
|
| |