Gene PHATRDRAFT_16669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16669 
Symbol 
ID7198994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp359507 
End bp360298 
Gene Length792 bp 
Protein Length263 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185265 
Protein GI219130213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCGATTGT TTCGAGTTAG GCCATTCAAG GTAAAAGTTG ATTACACTCC TCAGAAAGTC 
GATCGAAAAG CTCTGAAAGA CGGAGCGTTC GTCGAACTTG TCAATTTGAG CCCCATCGAT
GCACTGATAT TGACTCTAAA AAAGGTCGAA ATAGAAGGAA AGACAGGCTT TGGCGAAGTC
CTTCCCATCC TGATCCAAAG CTGGATTCAA GAAATATGTA GTACACAGCT CCTCAAGTTT
GTCACGAACA TGAGACCCTT GGAACCCATT ACGCAGGTTG GAGAGACAGC TGTGGATATG
ATTGTTTTAC CTTGGGAAGC CTTTCGGAAC GGTGATAGTG TGCAAAAGGC AATCCGATCG
GGAACAACAA GCTTTGCTTC GACGCTAGTG TATGAAGCTT TTACAGCAAC ATCGCGAGTT
GCTGGGTACG TAGCGGATCA AGTAGGTCGC CTTGGACGAG AGGAGTTTGA CCGGTCCAAC
CAGCCATCTC GTCCTCTTGA AGCACCCCGT CGTGCCACCG ATGCGGCGCC ACACGCTCTG
CAGAGTGTCA CTCGTGGGTT ACAAGAAGCA AACTACAAGA TTGTTATCAT TCCGTACCGT
GAGTACCAGA GAACCGGAGC CCGTGGTGCG ATTAGGAGCG TAGTAAAGGG CATTCCGGTG
GCGATTGGTG CCCCCACAAG TGCAGCAGCC GAAGCCATAT CCTACGCCTT GCTCGGAGCT
CGCAATCAGA TTCGGCCTGA TATCCGAAAA GAGGAAGAAT CGAGCCAACG TGGTATGCAT
CTAGATCGTT AA
 
Protein sequence
FRLFRVRPFK VKVDYTPQKV DRKALKDGAF VELVNLSPID ALILTLKKVE IEGKTGFGEV 
LPILIQSWIQ EICSTQLLKF VTNMRPLEPI TQVGETAVDM IVLPWEAFRN GDSVQKAIRS
GTTSFASTLV YEAFTATSRV AGYVADQVGR LGREEFDRSN QPSRPLEAPR RATDAAPHAL
QSVTRGLQEA NYKIVIIPYR EYQRTGARGA IRSVVKGIPV AIGAPTSAAA EAISYALLGA
RNQIRPDIRK EEESSQRGMH LDR