| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50189 |
|---|
| Symbol | NTT3 |
|---|
| ID | 7198874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011695 |
|---|
| Strand | - |
|---|
| Start bp | 319172 |
|---|
| End bp | 321464 |
|---|
| Gene Length | 2293 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | nucleotide transporter 3 |
|---|
| Protein accession | XP_002185087 |
|---|
| Protein GI | 219129839 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.384013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGCC GTCACGATCC GTTTCCGATG CAATCTGCCG AGGCCCAAAA GCTGGCTAGA
GATTTAGAAA ACTCTTCCGG CGGTAGTGGG GAGCCCGGCA GCGAAGATTG GAACCGAATG
TCTACCGACA CTGGAACGAA TCCATCCCGC TCCGCTGCGG AGGATTCCGA AAGTCGCAAT
GCGGCAGGGC AGAGTCTCGT GAGCGGCGGG CGATCCAACA ACAAGAAGAA AAAGAACGCA
CGGACCAACA GGAACACGGG CGACAACGAC GACGACCTTC TGAGTGACGA CGACAGTGAT
ACGGAACAGG AAGATGATTT CTTGGACCGT CCCTTGTGGG AGTCGCGTCC AGGAAATCGC
ACGTGGAGTC GTATGCTGCG TGCTCTCGAA AACATCTACC AACGATTGTA CGGAGATCAA
TTGCCTCCGA GTGAAATGCT GCGCACATTG TGTCTCGCTA CCACGCTCTT TTTTATGATC
GGTGGATACT GGTTACTGCG ATCCCTCAAA GATCCCGTTC TCACGGCTCT CTGCGGCGTG
AGTGTCATTC CCAAGGCAAA AATGCTCTCC GTGGTAGTCG TCCTCGCCGT AGTTTCCGTT
TACAACCATT TTCTTGATTC CGATATTCCC CGACACAAAC TCTTTTACAT TTTTGGAACC
TTTTACTTTG GTCTTTTCTC GCTCATTGCA GCTTTGTTGA TGCATCCCAC CTTGGGACTC
GCCAATCAAC AACCCAACCC AATGCGCGTT CTGGGTTGGA TCAGCTACTG CTCGATCGAA
AGCTTCGGTT CCGTCATGGT CAGTTTGTTT TGGAGTTTTG CCAATTCCAA CATTTCTCTC
GAAACCGCCA AGGCCAGTTA CGGTGTCATG GTCGCAACGG CACAACTGGG TAGTATTTTG
GGTCCGACCG TCGTTAACGC CTACGCCGCG ACGTGGGGCG TCGCCAAGTG TTACGCCGTC
GGGGCCGTCT GCATGCTCCT CCTGCAGGGC ACCATGTACG GTTACATTCG TGTCTACGGA
ACGATCGAGC GCAATGCCGC CAGTGCCGCC GCCACCGCCG CCAAGGCGGC CTCGAAACAG
AAACCCAAGG CGGATATATT GGAAGGACTC AAACTCTTTT GGAAACACCA TTACATCAAA
GGAATTTTCG CCATTTCGTG TCTGTTCATG GTGGAAGTCA CGTACGTATT GGAACAAAGT
TGGTGCATCC GATATTGGAA CGTTGCAACG CTCGCTGACA CTCGTGTTGC TTGTTTCCTC
AGGATTGTCG ACTTTACGCT TAAAGTGTTG GCGCGCGACT TTTTTGCCGA AGAGCATCCT
TGCGAAATAG GGATGAGTTG CTACGCGGAT AACGGTGATC ACGGCATGTC TGAAGCCGCT
ACGGCCGCTT TTACGACTTT CATGGGTCTT TTTGGGCAAG CCACCAATAC ACTTTCCTTT
CTGCTCAGTC TCTTTGGTAC TTCGGCAGTC ATTCGATATT TGGGCTTGCG CTTGACCCTG
CTTCTATTCC CATCGCTCTG CTTGGCCGTT ATAATTTTTG TCCGATTTCG GCCGACGCTC
TACGTGGTGT TTGGGGCCAT GATTACACTG AAAGCCTGCT CGTACGCACT CAACAATCCT
ACCAAAGAAA TGTTGTACCA GCCCACAAGT TCAGCTGTCC GCTACAAGGC CAAATCTTGG
ATCGATATTT TCGGAGCACG GGGTAGTAAA GCGATGGGTT CGGTAGTGAC CAACGCCTTT
TCCGATAGTG CCACTCGACT AGTCGCCAAC GGCAGTTTGG TCGGCATGGC CGTGGCTTCC
TTTTTAATAT GGAATGCCAC CTTTATGGGG CGCAAGTTCG ACGAGTACAC CGAGTCTGGG
TATGTGGTAG GGGAAGGATT TCCGGAAGAA GCTGGTGAAG CGCATCTGGA GCTCGCGACG
AGTCAAAACG AAGAAGACAC GAGCTGTGCA ATTTATGATG ATGCCGAGAC GGGTGCTGCA
GAAGAAGGGC AAGAAGACGG ACGCGAGAGT GGCAATCATG ATGACGATAG GGAGGATACA
AACGTCGACG ACAAACGAAA ACCAAAAGTA ATGATGGTAT AAGCCTGTTG TTACTTTCAA
ACTCTTTCGC TATTACAGCA TTCTCTTTCT CCTTCCAATA GTTTACAGTT TCCTCTCTTT
CTTTGATTTA TGAATTCACT GTTATACAAG TTATTTTTCA TATATGTCAT TCATGAAACT
AACAGCAAGC ACTATTCCAA TTTATGAATG CATATATATT CATGGAATTA TTTTAAGTGC
TACTCAAATT GGG
|
|---|
| Protein sequence | MVRRHDPFPM QSAEAQKLAR DLENSSGGSG EPGSEDWNRM STDTGTNPSR SAAEDSESRN
AAGQSLVSGG RSNNKKKKNA RTNRNTGDND DDLLSDDDSD TEQEDDFLDR PLWESRPGNR
TWSRMLRALE NIYQRLYGDQ LPPSEMLRTL CLATTLFFMI GGYWLLRSLK DPVLTALCGV
SVIPKAKMLS VVVVLAVVSV YNHFLDSDIP RHKLFYIFGT FYFGLFSLIA ALLMHPTLGL
ANQQPNPMRV LGWISYCSIE SFGSVMVSLF WSFANSNISL ETAKASYGVM VATAQLGSIL
GPTVVNAYAA TWGVAKCYAV GAVCMLLLQG TMYGYIRVYG TIERNAASAA ATAAKAASKQ
KPKADILEGL KLFWKHHYIK GIFAISCLFM VEVTIVDFTL KVLARDFFAE EHPCEIGMSC
YADNGDHGMS EAATAAFTTF MGLFGQATNT LSFLLSLFGT SAVIRYLGLR LTLLLFPSLC
LAVIIFVRFR PTLYVVFGAM ITLKACSYAL NNPTKEMLYQ PTSSAVRYKA KSWIDIFGAR
GSKAMGSVVT NAFSDSATRL VANGSLVGMA VASFLIWNAT FMGRKFDEYT ESGYVVGEGF
PEEAGEAHLE LATSQNEEDT SCAIYDDAET GAAEEGQEDG RESGNHDDDR EDTNVDDKRK
PKVMMV
|
|---|
| |