| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50164 |
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| Symbol | |
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| ID | 7198858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | - |
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| Start bp | 241296 |
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| End bp | 244122 |
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| Gene Length | 2827 bp |
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| Protein Length | 741 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185072 |
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| Protein GI | 219129808 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00402941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGTTTTTTGC GAAAATGCCC ATTTTCTCAT TGCTTGCATT CCTTCTTTTG CTGGTCTCCG
CCAGCATTGC TACTGTCACC GGTCAAGACA TCGGAAACAA CACCGATGTC TCATGCGTGA
GACGGTGGTT TGCCACTGTT GAAGAGGCTG TCCCTATGTC GTCCCCTCAA CTGGTTGAGC
TCGTTTTGCT AAATCTGGGC ATGAGTAACA GTAAGCTAGT GAGGATGCAC CTGGGAACAT
TATTGACTGA GCCAACCCCA ATTGTCTCCA TGACCTCTAG GTCTAGTGAG TGTCTCAAAT
CAAATGTTCC TATGTCCTCC ATCTGTGATG TATTGGACGG GCCCTATGTT GCCAGCTTCG
GAGCCAACAG TAGCGACACC TCGCAGAAAA ACGTGTGGGA ATATCTTGTC AATGATGCCA
TTGTTTACGA TAGAATCACA AGCGCTTCTT TGTCCAATTT TGCGTTGCTT TCTGAGCTTC
TTGACCACTT TAAATCCCGT CGTGAAGAAG TTGAAGCTCA TAACAAAGCC TTCTTCCCAG
GTCCGAGGGG CACCTTTGTC CGTGAGAAGC TACTTGGTAT TTCAAAAAGT ATTGAAATTT
TGACCACTAC TCTTGGTGGA AGTGTGCCCA ACCCGGGATT TCAACAAAGT CTGCAAACCA
ACATATTTGA GGCTGTCAAG CTTGATGCTA AAACTGGTCA TGACAACAAT TCTAGAGTTG
GAGTTGCGTT GGCCAGTACT ATCAAGTTTG GTCCTAGTGT GGACAGCCAT CAGTTCATGT
ACAGACTAGG AAAGGAGTGG GTAGATGCCT ACATTGCCTG GAACACTGCA TTTGTAATTG
GGGCACTACC TGTTAGCAAA ATGGTTAAGC TTCTGATACC ATCTGTCACA TGTAGTGCAT
CTCAGTCTAT TCAGGGAGAG GGCTTCATTG CTGCTCGCAT CATATCTCTT TCACTTGCTC
TCTATGAGCT TACAGCTCTC CCAGATCAGG TGTACATGTC TTTGAGTATT GACTCAAAGA
AGCTTGATGA CATCAATGCC TTCCTCCTGT CAGAAAGGGA CAACGTTGAC TTCAACACAG
AGCTGAGATA CCCATTGGTT GAGGCAATGG GACAAAGCAA CTTGCAATAC AGTATCCTAA
CAAGTCCCTC AGTGACAGAA GTTGAAGAGA TGTTGTACAA GCTTTGTGGC AACCACTGTC
ACAATGGCTC CTGGCAAGTG ACCGACACAG TGCCAATTGC TCTATTGGAT GATGAAGACT
TCCAGGTCTA TGTGGCACTT GTGCTGTGGA TGACAGCGCT TTTGGCTGGT TTGGGCTGTG
AGTTGCTGTT TTGGTTCAAG CTGATTGACC AAGGTGGCTG GTCAGAGGAA CAAGAGTCAC
TGTGGTGGGT TGCCCAGTTC TTCTTCCCCT TGTGGGCATC AACATGTCTT GGATTGGCCT
TGCAGAAAAA CTACTTGGCA CTTCCTTTCC TGGTTTTTGG TCTATTCAAG TTTGGAATGC
CAGAAACACT GTCATACATG TACACTGCCT TGTACCAACA ATCCAAGTCC ACATTAGCAC
GAATTGGGGA CTTTTTGAAC TCAACTGGAA CTGTGCTCCA TCATTCATCA GCAATATTGC
TGATTACTTT ACTGCTCTCT GGCGTTGTCC CTCCCAGTTG TCATATTGTT GCCCCCATTT
TACTGTTAAC CATGCAGCAC TGGTTTGTTT TGGTCAAATA CATGAATTTT TGGGCCTACG
CAGCACTCGA AATAGTGCTT GAGATATGGT TTGAGTGGGT TCTTCTCTCA GAGTTCCAGT
ACTTGCACTC AGTTCATTGG ACACTTATAG TGGCTGGATT GGGAATGCTT GTTGCCCATT
GGATTTACCT GGCTGCTGCT GCTTTGGAGC TACTTGCCTT ACAGTCTGGC AGGGATTGGG
ACACATCAAG AAAGGATGAG ATGTTTCTTG ATGATACCAC CACTGCTGTT GAAGCCACTT
CCCAAGCTTT AGTCAGCAAC CTCAAGAAAG GTGAAGGGAC TTGCAAACGA AAAAATGGTG
TTGCCAGTGT CTCTTTTGAT AGCAAAGCCA AGTCTTGGTC AGATGACGTG CAGATTCACT
GTGAAAGTGA AACTAGACCA ACTCTTGCAT CAGGATCTAG AAGAATGCTA CTTGGAAAGA
CTGGATCTTC AAAGAGGCTT CTTAGTGTTA AGGAAATGGT TCAAATCTCC GTGAAAGATT
TGCTATATCT TCCGCATTGA GTTGTCGGGA ATTCATTTCA ACTGCCCAGA TTGCTACTCT
GGTGCACAGT CAAGATAAAG AAAAACAGGA ATCTGCTCAA CACAAGCCCA CTGCCTCGTC
CTCAGACGAT CTTGGCCATC GAATTGATAT TGCCCACCGT GACAATTCTG GAGACAACAG
TTCATCTGTT AAAGAAAGAA TGTGGTTTGT GGTTGTGAGC CTCTTTCTAG TCTTTGTTCT
TCTCAATGCG TTGCTGGTTT TCATTGTGGT GCTGGTGATC AAGAACTATC CTGACTACAA
AAATGAAAAG TTTTTCTCCG ATTTTGACAA TCCATACAAC GACATTTTGA AAGACACCAT
CCCCTACATT CAGAATTGGT ATCGCAACCT TGATCATACC CAACCCTTAT TGTCAGAGGG
GGGGATCTAG TAGCTCATTG GTGTATGCCT TTTGCAGAAC ACCTTTGCTT GATTGTCGGT
TGTTTTGAGA ATTGATTGAA GAGGAGAAAA ACTGTATGGA AGTCCAACCG GCATTAGCAT
AAGGCAATGA AAGAGTCTTT AGAACAGCAG CTAGAATAAT TTATTTATTT CAGGATTTAT
GTTAGTG
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| Protein sequence | MPIFSLLAFL LLLVSASIAT VTGQDIGNNT DVSCVRRWFA TVEEAVPMSS PQLVELVLLN
LGMSNSKLVR MHLGTLLTEP TPIVSMTSRS SECLKSNVPM SSICDVLDGP YVASFGANSS
DTSQKNVWEY LVNDAIVYDR ITSASLSNFA LLSELLDHFK SRREEVEAHN KAFFPGPRGT
FVREKLLGIS KSIEILTTTL GGSVPNPGFQ QSLQTNIFEA VKLDAKTGHD NNSRVGVALA
STIKFGPSVD SHQFMYRLGK EWVDAYIAWN TAFVIGALPV SKMVKLLIPS VTCSASQSIQ
GEGFIAARII SLSLALYELT ALPDQVYMSL SIDSKKLDDI NAFLLSERDN VDFNTELRYP
LVEAMGQSNL QYSILTSPSV TEVEEMLYKL CGNHCHNGSW QVTDTVPIAL LDDEDFQVYV
ALVLWMTALL AGLGCELLFW FKLIDQGGWS EEQESLWWVA QFFFPLWAST CLGLALQKNY
LALPFLVFGL FKFGMPETLS YMYTALYQQS KSTLARIGDF LNSTGTVLHH SSAILLITLL
LSGVVPPSCH IVAPILLLTM QHWFVLVKYM NFWAYAALEI VLEIWFEWVL LSEFQYLHSV
HWTLIVAGLG MLVAHWIYLA AAALELLALQ SGRDWDTSRK DEMFLDDTTT AVEATSQALV
SNLKKGEGTC KRKNGVASVS FDSKAKSWSD DVQIHCESET RPTLASGSRR MLLGKTGSSK
RLLSVKEMVQ ISVKDLLYLP H
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