Gene PHATRDRAFT_50151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50151 
Symbol 
ID7198851 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp201224 
End bp202325 
Gene Length1102 bp 
Protein Length285 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184988 
Protein GI219129633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACATTGCT GAAGAGATTC GGGAACGACC CCTTTCGAAT CTAACTAGAG AAAGTCTTTC 
CCATCGTTCT CCTAAATCGA CGAACGGGAC ATTGCTCGCA AGGTTTTGGT ACGATAGAAG
GATCGCCACC ACGCGACGGA GGAGGGGTAC CAATTCCGGA ACACATTCCA TAGCCCACTT
TAGGAAGACG TGCGTCCGCT TCCACTTGCC TTAGCCGCAG AATGAACGAC AACAGCGAAG
GACACCACAA GCGTCGCAAT AAGGGTACCA CGGGATCCCT TCTGTCAATC TTACAACGAT
CGACCTTGCC GTTGGCGAAC TCTTTCTCCC GTGGCAAGGG AGGCGTTCGC AAAAGTACCA
AGCCGCTGCT GCCGACCTCA TCGTCGGCAG GGACGCACTC TCCCAAAGGC GGCGGAAGCA
CGAAGAGCAG CAACAACAGC CACAGCGCTA GCAGTAATCA CACGATTGAA TTGTATAGTG
TCCGTGATCG ACATGATTCG ACAGGAAAAC GCGCGTTTAA AGTTCAAATG CCCCGACGGC
TATTGTACTA CACACTGGGA GTCTTTTTGG TTCTCCCGGT ATTCATCTTT ATATGGAAGG
AATTTCACCT GCACCCTGCG CCGCACAACG ACTCCGTTAT GGTCAAAGAA AGTTGGACGG
CGGGTCGCCA TGTTGGGCAT GAGCGGTTCG CAAACTGGAT GGAATCGGCG GCTTTGCCGG
ATCCAAATGC GTACGACAGC AACAATGTTA CCGTTACGTC GGAATCTCGA GAGGACGAGA
TTGCGGCACC TGCCCAGAAG GGATCAACCG ACACGAATCC TGCGCTTGAC GCAAATCAGA
ATACGAAGGA AAAGTCGGCG CCAACATCTG ACTCTCTCCT CCCGGCCAAG ACGGCATCAG
CGGACCAGAC TAAAGTACTT TTACAGGATG CTGTGGCGCT GAATGGCAGC TCCGACCCAA
AAAAATCCAC GACAGCATTA ACTGCAAATG AAAATTTAGG GATAACGCAA CAAGGTCTAT
CAAATGAAGC GTTTGCTCAG CTTGTCAAGT CAGTGGACGT CAAAGCCACG AGCAGCACGG
AAGATCACGA GACGAACAAT AA
 
Protein sequence
MNDNSEGHHK RRNKGTTGSL LSILQRSTLP LANSFSRGKG GVRKSTKPLL PTSSSAGTHS 
PKGGGSTKSS NNSHSASSNH TIELYSVRDR HDSTGKRAFK VQMPRRLLYY TLGVFLVLPV
FIFIWKEFHL HPAPHNDSVM VKESWTAGRH VGHERFANWM ESAALPDPNA YDSNNVTVTS
ESREDEIAAP AQKGSTDTNP ALDANQNTKE KSAPTSDSLL PAKTASADQT KVLLQDAVAL
NGSSDPKKST TALTANENLG ITQQGLSNEA GRQSHEQHGR SRDEQ