Gene PHATRDRAFT_50142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50142 
Symbol 
ID7198937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand+ 
Start bp175556 
End bp176396 
Gene Length841 bp 
Protein Length121 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184980 
Protein GI219129616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.794727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAAAGC GTTTGTCAAA CAACGCAACC ATGGGAAAGC GCACAACATG TGCTCCTGCT 
AACTGTGAAA AGCACTTAAC GGTTTCCAGC TGAATAGCGT TACTCACGCG TTCTGGTCAA 
AGAGCGCTAG TTTAAAGGTG AGAAATTAAA GTCATGATCG TCAAAAGCGT ATCTTTTCTA 
GCTTTCTTGT TTGCCGGGTC GGTCCTCGGA TTTGGTATCC GGCCGCACAA GCTGGAGACA 
AGAAAACAAA ATGTACACCA ACGGCTAGGC TTGATCAGCA GCTCATCTAC AACTTCGTCC 
TCCGTAAAGT CTCCAAAAGT ACCTTTGCTC CATGATATCC CCGAATCGTT CCAGCCTCTG 
TTTAACAGTG CGATCAATGC TACTACTCCC CGGGATGCTA ACACCTCCAA CCAAGGTCAC 
GATTCCTTTC GATATGAGTG GGGAACTTGG GCGGTTGATT CAAATGTCGA ATATTTAATG 
GACCTTATGA ATGAGGTTCG TGTACAACGA AGCTTCTACG AGACTGTTGT ACCCGAGGAC 
ATGAGGGTTC CACTACGGCT CCGAGTTGCA GGTGGATTGG ACTGGGATTG TATTTTGCAT 
GTGTTGCCTC CCGGCACATC TTGGCAAGGA CGATGGACAA CAGGGTCCTG GGCCATGATC 
AAAACACTTA CAGGAGTCGC AGAAATAGCG TCACTTGTGG GGCCCGATCG CAATGGAAAT 
TTGCGAAAAC GAACGTCGAA AGATTTGCGA GGTGGGAGTG ACGGATCGCT AGGCGGTGGA 
CAATCAACGG CAGGAGACAA ATGCATCAAG TACGTTGGTG GACCATTACG GAGCTATTCA 
G
 
Protein sequence
MDLMNEVRVQ RSFYETVVPE DMRVPLRLRV AGGLDWDCIL HVLPPGTSWQ GRWTTGSWAM 
IKTLTGVAEI ASLVGPDRNG NLRKRTSKDL RGGSDGSLGG GQSTAGDKCI KYVGGPLRSY 
S