Gene PHATRDRAFT_50141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50141 
Symbol 
ID7198936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp174453 
End bp175314 
Gene Length862 bp 
Protein Length252 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185064 
Protein GI219129791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.687122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAACAGAAG CTCCACCATG CCACACTTTA TCACCAATCG ACCTCGAAAG TTTGCCGTTT 
GGCAAGATTC GGGAGTCTTA AAGTCGCATT TTAGGTGGGA ATATGTGAAC GTAGTCGTTT
ACGCCGTCGG TGGGCTTATT TTTGTTCTAG GCAGCGTTTT CTTTTTACCA GAGCTGACAG
ATCTGATCGA AGTGGGAGCG TGGCTTTTTG TCGTCGGCTC GTTCCTCTAC TTGATTGTTT
CCTCCCACGA TTTCGTAGAG TTTCTACACT ATGAAAATAA GAAAAGCATC CTTGACGCTA
CCGCAGCAAT CACATATATA TTGGGCTCTC TACTCTTTAT TGTTGGCAGC ATTCTGTTTC
TTCCTCAAGT CGAAGAGCAA ATCGCCGGCG CTTGGTGCTT CATTACTGGT AGTGCCGTAT
TCGTGGTCGG GGCAATCCTT AATGCCATGC AAGTCTTTGA GTTTTCTACA GTTTGGACGC
AACGATATAT GAATTTGACT GCGGCATGCT ACATGATTGG TTCGACCTTG TTTGCTTCAG
CTTCCGTTCC CTACCTATTT TCTTTTGACG ATGCTGGAGA CAAGCTTACC TTAGATCGCT
ATCTAGGATA TCAATACATT CTTGGAAGTC TATTTTTCCT ATTGGGTGGG CTTCTCAACG
GATTGCGCGC GTATCTGCTC CAGACCGGTG AAACGAAAAA GCAAGAGGAC CAAGTACACT
ACGCGAGTCA AACTGCCGAC GAGCATAACA AAAGAAACAG GGCTAACGAG GCGTGATTCT
CCTGCCAAAG GAGTTGAATG CTCATTTTCA ATAATCCAGC GATCGCAATC TGATTGGGGA
CGTTCACTCT GTTAGTCCTT CC
 
Protein sequence
MPHFITNRPR KFAVWQDSGV LKSHFRWEYV NVVVYAVGGL IFVLGSVFFL PELTDLIEVG 
AWLFVVGSFL YLIVSSHDFV EFLHYENKKS ILDATAAITY ILGSLLFIVG SILFLPQVEE
QIAGAWCFIT GSAVFVVGAI LNAMQVFEFS TVWTQRYMNL TAACYMIGST LFASASVPYL
FSFDDAGDKL TLDRYLGYQY ILGSLFFLLG GLLNGLRAYL LQTGETKKQE DQVHYASQTA
DEHNKRNRAN EA