Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50141 |
Symbol | |
ID | 7198936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 174453 |
End bp | 175314 |
Gene Length | 862 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185064 |
Protein GI | 219129791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.687122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAACAGAAG CTCCACCATG CCACACTTTA TCACCAATCG ACCTCGAAAG TTTGCCGTTT GGCAAGATTC GGGAGTCTTA AAGTCGCATT TTAGGTGGGA ATATGTGAAC GTAGTCGTTT ACGCCGTCGG TGGGCTTATT TTTGTTCTAG GCAGCGTTTT CTTTTTACCA GAGCTGACAG ATCTGATCGA AGTGGGAGCG TGGCTTTTTG TCGTCGGCTC GTTCCTCTAC TTGATTGTTT CCTCCCACGA TTTCGTAGAG TTTCTACACT ATGAAAATAA GAAAAGCATC CTTGACGCTA CCGCAGCAAT CACATATATA TTGGGCTCTC TACTCTTTAT TGTTGGCAGC ATTCTGTTTC TTCCTCAAGT CGAAGAGCAA ATCGCCGGCG CTTGGTGCTT CATTACTGGT AGTGCCGTAT TCGTGGTCGG GGCAATCCTT AATGCCATGC AAGTCTTTGA GTTTTCTACA GTTTGGACGC AACGATATAT GAATTTGACT GCGGCATGCT ACATGATTGG TTCGACCTTG TTTGCTTCAG CTTCCGTTCC CTACCTATTT TCTTTTGACG ATGCTGGAGA CAAGCTTACC TTAGATCGCT ATCTAGGATA TCAATACATT CTTGGAAGTC TATTTTTCCT ATTGGGTGGG CTTCTCAACG GATTGCGCGC GTATCTGCTC CAGACCGGTG AAACGAAAAA GCAAGAGGAC CAAGTACACT ACGCGAGTCA AACTGCCGAC GAGCATAACA AAAGAAACAG GGCTAACGAG GCGTGATTCT CCTGCCAAAG GAGTTGAATG CTCATTTTCA ATAATCCAGC GATCGCAATC TGATTGGGGA CGTTCACTCT GTTAGTCCTT CC
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Protein sequence | MPHFITNRPR KFAVWQDSGV LKSHFRWEYV NVVVYAVGGL IFVLGSVFFL PELTDLIEVG AWLFVVGSFL YLIVSSHDFV EFLHYENKKS ILDATAAITY ILGSLLFIVG SILFLPQVEE QIAGAWCFIT GSAVFVVGAI LNAMQVFEFS TVWTQRYMNL TAACYMIGST LFASASVPYL FSFDDAGDKL TLDRYLGYQY ILGSLFFLLG GLLNGLRAYL LQTGETKKQE DQVHYASQTA DEHNKRNRAN EA
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