Gene PHATRDRAFT_50135 details

Gene Information

• Locus tag: PHATRDRAFT_50135
• ID: 7198933
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 155229
• End bp: 157421
• Gene Length: 2193 bp
• Protein Length: 626 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002184976
• Protein GI: 219129608

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCGATAGAC CCACCAGAGG GCCAAACCTC GGCACCCTCA CGGTATCGAA TCACATCACA 
CCGTGTGTGG GAGTGAACGT ATTTTATTTT CGGCAGTGGG ACTGGTCATG GCGACAATGG 
CCGCCGCAAA CGTGATAACG GGACAGTTCG ACGATGCCGA CAGTGACGAA GAAGACTTTG 
TCGCCCGCAT GCAAGCACAA CGGCAGCCAG CGACGTTGCC CGTCCAATCC TCAAAATTGG 
CATGCGTTTC TTCGTTCACC CGACCACCCG TCGAGTCTTT GCAAACTGTT TTCCACTCGC 
CGTACGCACG AGATGACGAC GACGACGGCA ACGACGAGGA TGATACCTAC GACGACGACG 
AAGTATTACG ATTGGGACGA TGCACCGCTC ACGTCCGTTG CGGCACAGAG TGTGGCGCAA 
GCGTCCGCCG CATCATCCAA GCAAATGAAT CTGTCGCACG CCGTATCCAA CCGTGTTACG 
CAGATGGAAC ACCTCGAAAC GCATAAGCGT ACCTTGACAC AGGGTAGGGA CGATCGGGCC 
ACCTCGGAAC AGGTACTCGA TCCCCGAACG CGACTCATAC TCTTCAAGTT ACTCAGCCGT 
GGATTCCTGG AAGCCATCGA TGGATGCCTG TCCACCGGCA AGGAAGCTAA CGTTTACTAC 
GCCAAGGCTG GTAAACATCA TCTGCAACCG CAACGGTACG ACGCCACGCC TACGCCTACC 
GACGAGGACA ATTGCGACAA CACAAAACCC CGGCACGTTA CCGAATACGC CATTAAAATA 
TACAAAACGA GCATTCTCGT ATTCAAAGAC CGCGATAAGT ACGTCGCGGG CGAACATCGC 
TGGCGCAAGG GTTACTGCAA ATCAAATCCG CGAAAAATGG TCAAGGTCTG GGCAGAAAAA 
GAGATGCGCA ACTACCGTCG CATATACGCC GCCGGTATTC CCTGTCCGGA ACCCATCTTG 
CTCAAAGCGC ACGTACTCGT TATGGAATTC CTCGGTGTCG GCGGTTGGCC CTCCCCTCGG 
CTCAAGGACG CCGCGCTTTC CGACAAGCGC CTCCGGGAAG CCTACGTACA ATGCGTACTC 
ATCATGCGAC ACTTGTACCA ACGGTGTAAA CTCGTACACG GCGATCTGTC CGAATACAAC 
CTCCTCTGGC ACGAAAACCA AATTTACGTT ATTGACGTAA GTCAGTCCGT GGAAACAGAC 
CACCCCTCGG CGTTGGATTT CTTGCGCAAG GACGCCTCCA ACGTCAACGA TTACTTTCGC 
AAAGTCGGAC GACTCAACGT CATGACGGTC CGTCAGTTGT TTGAGTTTGT CACGGCATCG 
GTTTTGCCGT GTGACCAGCC GAACGTCGCG ACGGAGCAAG CCGAATTGGC GAGTCTCGAC 
GCCATTATGC AACACGTGGA CCAAACCGCA CTGCAGTTGG CGGAAACATC GGAACAGGGA 
CAGCGCAAAG TAGAACAGCA AGAGGCCGTG GACGAAGCCG TCTTTATGAG CAGCTTTTTG 
CCGCGGAGCC TCAACCAAGT AGCCGAGCAC GAAATTCAAA AACTGGCAAC CGGGGAGGTG 
GAAGACACCT ACGCGCAAGC CGTCGCGTCC TTGACAGGCA ATCGCGATGT GGTCGAAGCG 
GTCGCGAAAA AGTTGGGCCG GAACGACTTC ATGACAAAGT CGGTCCAATC CATTCTGACT 
AACGCATCGT CGAGGGAATC TCCTCAAGAA GAGGAGCGAA AAGCCGGAGG GAAGAATGGA 
GTGCATTTTT CGGCGGTATT GGACGAGAAA GGCGACAAAT CGCCAAGTAG GCAGAGTGGG 
GAAGACGAGT TCATGTCCGA ATGTGACGAT GACAGTTCTG TAGATAGCGA GGGTGAGTCC 
GTGGACAAAG AAATTGGTTT CGTCAAGACT CCTATGACCC CGGAAGAGTT TACTGCCATG 
AAGGAAGCTG TAAGAACGGA GCGCCGAGCA AACAAAAAAG CCGTCAAAGA CGCGAAAAGC 
GAACAGCGTC AGAACAAGGT GAAAAAGAAG GATAAGAAAC GAGCCATTAA AAAATCGAAG 
GCCGGAAATC GAAAGAATAA ATAGATCCCG GTACAAAATC GGAATTCCTA CGTGCCAACT 
CTAGAGTCCT CCTACCGAGC GATTCTGGGA TTATGCGGTT TTAGGAACAC TGGTTTGCAT 
TTGCGACTCC ATAGTAAATG AAAGTTGCCA GAC 

 

Protein sequence

MATMAAANVI TGQFDDADSD EEDFVARMQA QRQPATLPVQ SSKLACVSSF TRPPVESLQT 
YYDWDDAPLT SVAAQSVAQA SAASSKQMNL SHAVSNRVTQ MEHLETHKRT LTQGRDDRAT 
SEQVLDPRTR LILFKLLSRG FLEAIDGCLS TGKEANVYYA KAGKHHLQPQ RYDATPTPTD 
EDNCDNTKPR HVTEYAIKIY KTSILVFKDR DKYVAGEHRW RKGYCKSNPR KMVKVWAEKE 
MRNYRRIYAA GIPCPEPILL KAHVLVMEFL GVGGWPSPRL KDAALSDKRL REAYVQCVLI 
MRHLYQRCKL VHGDLSEYNL LWHENQIYVI DVSQSVETDH PSALDFLRKD ASNVNDYFRK 
VGRLNVMTVR QLFEFVTASV LPCDQPNVAT EQAELASLDA IMQHVDQTAL QLAETSEQGQ 
RKVEQQEAVD EAVFMSSFLP RSLNQVAEHE IQKLATGEVE DTYAQAVASL TGNRDVVEAV 
AKKLGRNDFM TKSVQSILTN ASSRESPQEE ERKAGGKNGV HFSAVLDEKG DKSPSRQSGE 
DEFMSECDDD SSVDSEGESV DKEIGFVKTP MTPEEFTAMK EAVRTERRAN KKAVKDAKSE 
QRQNKVKKKD KKRAIKKSKA GNRKNK