Gene PHATRDRAFT_50123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50123 
Symbol 
ID7198833 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp114930 
End bp116574 
Gene Length1645 bp 
Protein Length507 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185053 
Protein GI219129768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.386802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGGGCCCGTC GATCCCACAA TGCTGGCAAC GGCAACGAGC AACCAGAATA CGTACGGCTC 
CCTGGCCGTG GACCTCGACC GGAATGACGA AGAAGACGAC GACCAGGAAC AAGCCACAAC
GAGGCCGCTC TTGCCGCCGC CTTTGCCGCG TCACCGACGA CGCGAGATGG CAATGCGTCG
ACAGGGTCAG CAGAGTTCGG TGCTCGACAA GCTCTTTTCC GACGGCAAGA AGACTCAGTC
CAAAAGGAGC GTACGAAATA GGATGAATCA AGGACCTGCT CTACCACCGG CATCCTCCAC
GATCTTTTCC AATTCCAAGG CCTCCCAGGA CGATACCGTG CTACCGGATC GCCGGAAACA
TCAACAACAC CGACATTCTT TTGTGTATAC TTTGTTGAAT CCACATTCCA AGCGAATACA
AGCGGTTGCT TATAAACGTT TCATCTCCGT CGTCATTCTC GTCGACTTGC TCTTTTTCAT
CACGTCCACC GACGAACACA TCATGGCTAA ACACAAAGAC TTTTTCCACT TCAGTGAAGG
CGTGTCCAGT ACCATCTTCC TCATTGAATA TTTCTGCCGT TTGGTGATCA TTACAGAAAG
CAAGCGCTAT AAGGCTGCTG GCCCCCTTTT CGGTCGCCTG CAGTACCTGC GCAGCTGGCC
CGCCCTGATT GACTTGTTCG CCACCCTACC CTTCTTTCTC GAATACCCCA CGGGCTGGAA
CTTGCCCACG CTCACTTACT TGCGCTTTTT CCGACTCTTT CGAATTTTGA AAACCGAAGG
ATACATCCGA GCCATGGACG CCATCTACCG TGTGGTCTAC TACAATTCCG AAATTCTCTA
CGTCGCGGCC TTGCTCTGCA TTTTCCTCAT TCTCGTCACG GCCGTCTTGT TGTACTACCT
CCGCCCCGCC AACAAGGAAG ACGCGGAAGA CTTTGGATCC ATCGCGGCAA CCTTTTATAT
GAGTACGCTC ATGCTGACTG GTCAAGGCGG ACCAAGCGGA GAATTGCCCT GGTACACGAA
GAGTATTGTG CTCCTCACGT CCGTATTCTC TGTCGCCATG TTTGGTGCGT GTGCAACCGT
GCCGAGCCCG GCCGTAGACC AAGGGGCGAC ACTATCTTGA AATACAAACA CTCACACTGC
TTTTTTCCCC TTCGCTGACA CGACAGCCAT TCCGGCCAGT ATGCTGACGT GGGGATTCGA
AGCCGAAGCC GAACGCATGG CCAAACAAGC GCACAAACGA TTACTGCAAC GGCGCTCGAC
GCACGGTTCG TCGACGACGT CCACGGACGA TTACGAATCA GAGAGTCCGG ACGACGATTC
TACGGACGAG GAGTACTTTC GCATCATTGC GGGGGCCGAC GAAGAAGGTG ATGGCGAAAA
CGATACACCG TGGATGAAAG AAATGAGGGA ACGATTTATC AAAGCTGACG GGAACATGGA
CGGAACCTTG ACCCTCAAAG AGTTTTTTCA ACTCCAAGCG TCCATGGGGG AGGACCCTCA
CGATATCACG TCGTCTCAAA CGGCACTGGT CAATGCGAGT ATGATGTCAC GTATGGAAGC
TCTGGAAAGC ACGGTCGCAG CCAACGCGCT CAAGCTTGAT CAGATTTTGG CGGTCTTGTC
CGACTCTACG AAAGGACGTC GGTAG
 
Protein sequence
MLATATSNQN TYGSLAVDLD RNDEEDDDQE QATTRPLLPP PLPRHRRREM AMRRQGQQSS 
VLDKLFSDGK KTQSKRSVRN RMNQGPALPP ASSTIFSNSK ASQDDTVLPD RRKHQQHRHS
FVYTLLNPHS KRIQAVAYKR FISVVILVDL LFFITSTDEH IMAKHKDFFH FSEGVSSTIF
LIEYFCRLVI ITESKRYKAA GPLFGRLQYL RSWPALIDLF ATLPFFLEYP TGWNLPTLTY
LRFFRLFRIL KTEGYIRAMD AIYRVVYYNS EILYVAALLC IFLILVTAVL LYYLRPANKE
DAEDFGSIAA TFYMSTLMLT GQGGPSGELP WYTKSIVLLT SVFSVAMFAI PASMLTWGFE
AEAERMAKQA HKRLLQRRST HGSSTTSTDD YESESPDDDS TDEEYFRIIA GADEEGDGEN
DTPWMKEMRE RFIKADGNMD GTLTLKEFFQ LQASMGEDPH DITSSQTALV NASMMSRMEA
LESTVAANAL KLDQILAVLS DSTKGRR