Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50120 |
Symbol | |
ID | 7198922 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 105361 |
End bp | 106183 |
Gene Length | 823 bp |
Protein Length | 167 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185050 |
Protein GI | 219129762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGGTACTT GGCGTTCCTT GATCGATTTC TTCTGCTTGC TATCGATCCT TTTTTCTTCC CATGGACGGT ACGAATCCTA ACGGTGGCAT GTACAATCAC GACCAGCAAG GTGCGGGTCA GGGACAACCG CAACATCCCC AGCAGCAACA AATGCAGCAC ATGACGCAGC AGCACCAGTT GCAGCAAATG CTGGCGCAAA CGCAGCAGCG CCAACAGGAA CTGGCGCACC CGCAGCAGCC TCCGCAGATG CAACAGCCTC CGCAGACAAT GCAAGCGCAA CAGATTCAAC CGACGCCGAT GCAAGCGCAA CAGATTCAAC CGACGCCGAT GAAACCTCAA CAGGCGCCCC CGCAAATGCA GCAGCAACAA CAACAGCAGA CGCAAGGCGA CCCACAATTG CAACGTCTTC CGATTCGTGC TTATCTCGAC CAGACGGTCG TTCCTATCTT GTTGGATGGT ACGTGCATTG TATACAATCA TACAGGACGA GTGCACCTCG TTGTATAGTT GTCTAACCAC CACGCGGATG TGTGTTCAAT TCCTAGGCAT GGCCGAACTC GTCAAGGAAC GTCCGGCGAA GCCCATTGAG TTTTTGGCCT CGTACTTGTT GCAACACGAT CCGCAGCGCG TGCCCAAAGC CGGAGGCCGG TAAAGGAAGA AGCGTCTATC AAGCAGGCAC GGGTCCTGGA AGTTGCGGGG AAGCTACCGT TGTGGCCGAA ATGGAAGAAT TATTGTCTGA CGAGAGGTGG ATGCGATTGA AATCTATAAA ATCGGCTGCT TTGGTTTGTA GACGTTACGA TAAACTAGGT TTTTTTCGCT TCT
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Protein sequence | MDGTNPNGGM YNHDQQGAGQ GQPQHPQQQQ MQHMTQQHQL QQMLAQTQQR QQELAHPQQP PQMQQPPQTM QAQQIQPTPM QAQQIQPTPM KPQQAPPQMQ QQQQQQTQGD PQLQRLPIRA YLDQTVVPIL LDGMAELVKE RPAKPIEFLA SYLLQHDPQR VPKAGGR
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