Gene PHATRDRAFT_50120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50120 
Symbol 
ID7198922 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp105361 
End bp106183 
Gene Length823 bp 
Protein Length167 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185050 
Protein GI219129762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGGTACTT GGCGTTCCTT GATCGATTTC TTCTGCTTGC TATCGATCCT TTTTTCTTCC 
CATGGACGGT ACGAATCCTA ACGGTGGCAT GTACAATCAC GACCAGCAAG GTGCGGGTCA
GGGACAACCG CAACATCCCC AGCAGCAACA AATGCAGCAC ATGACGCAGC AGCACCAGTT
GCAGCAAATG CTGGCGCAAA CGCAGCAGCG CCAACAGGAA CTGGCGCACC CGCAGCAGCC
TCCGCAGATG CAACAGCCTC CGCAGACAAT GCAAGCGCAA CAGATTCAAC CGACGCCGAT
GCAAGCGCAA CAGATTCAAC CGACGCCGAT GAAACCTCAA CAGGCGCCCC CGCAAATGCA
GCAGCAACAA CAACAGCAGA CGCAAGGCGA CCCACAATTG CAACGTCTTC CGATTCGTGC
TTATCTCGAC CAGACGGTCG TTCCTATCTT GTTGGATGGT ACGTGCATTG TATACAATCA
TACAGGACGA GTGCACCTCG TTGTATAGTT GTCTAACCAC CACGCGGATG TGTGTTCAAT
TCCTAGGCAT GGCCGAACTC GTCAAGGAAC GTCCGGCGAA GCCCATTGAG TTTTTGGCCT
CGTACTTGTT GCAACACGAT CCGCAGCGCG TGCCCAAAGC CGGAGGCCGG TAAAGGAAGA
AGCGTCTATC AAGCAGGCAC GGGTCCTGGA AGTTGCGGGG AAGCTACCGT TGTGGCCGAA
ATGGAAGAAT TATTGTCTGA CGAGAGGTGG ATGCGATTGA AATCTATAAA ATCGGCTGCT
TTGGTTTGTA GACGTTACGA TAAACTAGGT TTTTTTCGCT TCT
 
Protein sequence
MDGTNPNGGM YNHDQQGAGQ GQPQHPQQQQ MQHMTQQHQL QQMLAQTQQR QQELAHPQQP 
PQMQQPPQTM QAQQIQPTPM QAQQIQPTPM KPQQAPPQMQ QQQQQQTQGD PQLQRLPIRA
YLDQTVVPIL LDGMAELVKE RPAKPIEFLA SYLLQHDPQR VPKAGGR