| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50112 |
|---|
| Symbol | |
|---|
| ID | 7198825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011695 |
|---|
| Strand | + |
|---|
| Start bp | 69136 |
|---|
| End bp | 70490 |
|---|
| Gene Length | 1355 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184962 |
|---|
| Protein GI | 219129579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACGTGGTTCG AGTCGGAGGC ACTGCTACGC TCGACCAGCC GCACTTCTTT CGCATCGAAC
ACCGGTAGTA AGCGGTCTTT GGGAAAGATC GTAAAGCGGT GGGACGCAGC ATGTCGCACT
CGGAAGCAGC GAACGACCTT GACGGCAGAA TCCGTGCGGA AAGCAAAGGC ACAACGCTGT
CGTTGAAACG AAAAGCTCCG CCGGAGCGTC GCGTCGGTTC TACAGCTCCA GACAAACATG
ATCGACGTAT CTATGCAACA GCGGCTTCAC CGGGTCTGCT AGCTGTCTTC TCCGCCGACG
ACTCGATCCA CAATGATTAC CGTAGCAGGT CGTACTCCGA GCCGATCAAA GCAAAGTTGG
AAGTAGACCA GAGCCTACTC TTCTCACCGT CTTCTGCCGC GAACTATGAC GAGCTCCGAG
AACGCAAGCG TTCCGCAACA AACTCTCGCA AAGCTGCTGC TACGGCTCGC CAAACGCTAG
ACAAAGGTAC CCAAGGTAGG GAAAACCTGT ACATGCGTCG GGACCCACCT TCTGTTGGAA
CCGAGTCGGT ATCCGTACAC GGTAATTCTT CGACGGAGGA GGACGATGTC GACCGCCAGC
ACATCCTCAA GCCAAAGCCA CGTTCGCCTG CGGACAAAGC TCGCTCGCAA CGACGTCGAT
TGCGGAAAAC AGCTGGTGCA GAAGTGCGCC GACGAAAGAT TCGAACGCTG CCATCCAATC
CACTAGAATT TGAGGGAGAC TACAAGACCC AATTTGCCCC GGAAGACGGA ACCGGCAAGC
CTCTCACCGC CACTAGTCTT TTGTACGTCA TGAATGTCAT GGAAAAAGAG TCCTCGGAAG
CAGTCAAAGC TGTCACCAAG GGATTCTCGC GGGACGAAAG TCGTCGGATT CGTCAGTCCA
CAACTAAACA TTCACAAGCT ATTCTGAAGA GTACGCGACT ATTTTTACGA AGCGCCAAAG
TCTCGACCGT CTACACAGGA GCTGAAGACC CTATGGGGAG CGGGCTTGCA CAGGCCAATA
AAACACGCAA AGCGGACATT GAACGGTCGA ATCGAATTTT GCAACAGTTG GAATCGCAAC
AAGATGTTTT AGAAGCGGAG TTGGCCGAAT ATGTTGAGAA GCAGTCGCAG CTGGAAGAGA
CACTGCGGGC GTTGCAAGCT TCTCAGGAAC GTGCTCATCC TTTGTTGATA CCTGCGCTGG
CCCCCGTCGC GGAAGAGAAC GCGTGGAATG AAGGCTTCCC AGCGCGACGA TTTCGTCCGG
CGCCCCGAGG TTGCATGCCC CAGCTTCTGG AAAAGCTGGG TGACGAAGAA TGGAGAAGCA
GAGGCAGTGC TTTGAATACA AACAATCCAC GGTAG
|
|---|
| Protein sequence | MSHSEAANDL DGRIRAESKG TTLSLKRKAP PERRVGSTAP DKHDRRIYAT AASPGLLAVF
SADDSIHNDY RSRSYSEPIK AKLEVDQSLL FSPSSAANYD ELRERKRSAT NSRKAAATAR
QTLDKGTQGR ENLYMRRDPP SVGTESVSVH GNSSTEEDDV DRQHILKPKP RSPADKARSQ
RRRLRKTAGA EVRRRKIRTL PSNPLEFEGD YKTQFAPEDG TGKPLTATSL LYVMNVMEKE
SSEAVKAVTK GFSRDESRRI RQSTTKHSQA ILKSTRLFLR SAKVSTVYTG AEDPMGSGLA
QANKTRKADI ERSNRILQQL ESQQDVLEAE LAEYVEKQSQ LEETLRALQA SQERAHPLLI
PALAPVAEEN AWNEGFPARR FRPAPRGCMP QLLEKLGDEE WRSRGSALNT NNPR
|
|---|
| |