| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50108 |
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| Symbol | |
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| ID | 7198913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | - |
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| Start bp | 60016 |
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| End bp | 61894 |
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| Gene Length | 1879 bp |
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| Protein Length | 425 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185041 |
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| Protein GI | 219129743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000277359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACGGTTCAG TGGGAAAAGA TCCCATAGTA CCGCAGTTGG CAGGCCCGAA CGAACAACTC
TACGATTATC GTGCCGCCTC TACACCAGCA GGAAGACTGT AGATGTCTCG CAGCCAAGCG
ATCTGGCAGC TCTATCGGAC GACCGCCAGA TTGAAAACTT ACAGTTACAT ACCAACACAA
TGGTTCTTCC ATCGAGATCC AAGACCATGC TGCTTCCCTT TGTCGTCAAG CGTTGCCACA
AGCTCTTGAC ATTCCTGGTC TTTGCATCGG CAATATATTT CGCTTGGAGG ACCTGGCGGG
CGGCGGCAAG ATTAGGATTG GCGGAAACTA CGTGGTTACA AAGTGCCTCT AGGGATGCGG
ACTGGAACGT TTTCGGCTTG CCTCCCTCCG CACAGCAATG GAATTCGGCA CCTCCGCCTC
AAGCATTGAC TCCCCCTCGT GAACGAAGAA ATAGATGTGC GATCAATCTG TACGGTCTTC
CCCGATCGTT TGCGCCAATC GTCCTTCCTG CACTCAGGCG AAACGTCATT GAACCTAACG
CAAAACATTG TTGCGACTAT TTTGTGCATT ATTATCAAGT CACGGAGGAA AAGGCGGGTC
GCTCCGGTAA CGGAGGTACA ATTAATCCAG AAGCCATTCG ACTGCTCCGA CAAGCGGTGC
ACGATGTTCA CAATGCTACC GGCAGTGGTG ACGTTCTTCC TAAGGTGGAG TTTCGTTTCG
ACACCGATGA TGCCTTTTGG AATCAGTACC AACCCCTCAT CGATCGAATA CGCAATACAA
AGGACGATGA AGGCCGGTAT TTGTACTTCC CTTGGCATTC TAAGGATTAC ATCTATCCTA
CCGCTACCGA CAACATTATC AAAATGTGGC ATAGTGTCCA GGCGGCGTGG AATTTGATGA
AAGCTCACGA AATAGTGCCG TACACCCGCG TAGCCATGCT GCGCTCGGAC GTCGTCTTTA
TGACCCCTAT TGATGTGTAT ATGGTTAACG GAAAGACAGA TGCACGCAAC ACCAAAGCCA
TCATTCCAGC TTTTGGGCGT CACCCAGTTA GTGATCGGTT TATTTGTGGC CCCGCCGCCG
CCGTCGAAAT CTGGGCAAAC CAGCGATTCG CTAGAATGGA AAATCATGTC CAATTAATGC
TGAAAGTCAA ACCCGGCTTT GGCATGCACT CGGAGCGATT TATGTACCAT ACCATTTTCC
CCGCTATACG CGAAAAAGGC GTGCAGATAG TCGAAGACAA CAAGATGTGC TTCGTCCGTG
CTCGGGCTGA CGAAACGGTC TGGATTGACG ATTGTGAAAA CCCACGGCGC GTCATCGCCG
CAAAATCGAT TGTTGCCCGC ATGGGAGACA AAATGAGTCG ATTAGAGCAA GCACTGGGCC
GTGCGTGCAC AACCTCAGCT GAGAAAATTC ACAATATGTG GGTTCAGGAT GTTGCGAATT
GCTCGTCAAC AAAATAGCGC TTGTGGGAGA TCTGTCTCGA TGGATGTACG TTCGGTTTTG
CGACTTTATT GAGCACTCAA GAATATCGAA AGAAGGTCTG GTCTGTCTGC TGTCTCACAG
AGCTACATCC CAATACATGA GTACGCGTTG CTTACTGCAA AGCTAAACGG AGTCTATTGC
CAAGCTTATG CTTGCGCGGA CTGTCTCCTA GACAAAGTAT ACAACCATAG TTGGGAGGGT
GAGAATGGAA CAAAGCATAA ACATGATCAA ATACGAAGGG AACGACAACA TGTTTAAGGT
CCTGAAAACT ACCTCATCAC TCAGTTTGTG GAGCAGTCCC ATTGGGAGCG AGAATTCTTA
AAGGAAACAG AAAACCAAAT TCATTGTGCA CTGTCAGTCT CATAGAAAGT GAACTACTAG
AGGAGCTGTC TAGTTCGAA
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| Protein sequence | MVLPSRSKTM LLPFVVKRCH KLLTFLVFAS AIYFAWRTWR AAARLGLAET TWLQSASRDA
DWNVFGLPPS AQQWNSAPPP QALTPPRERR NRCAINLYGL PRSFAPIVLP ALRRNVIEPN
AKHCCDYFVH YYQVTEEKAG RSGNGGTINP EAIRLLRQAV HDVHNATGSG DVLPKVEFRF
DTDDAFWNQY QPLIDRIRNT KDDEGRYLYF PWHSKDYIYP TATDNIIKMW HSVQAAWNLM
KAHEIVPYTR VAMLRSDVVF MTPIDVYMVN GKTDARNTKA IIPAFGRHPV SDRFICGPAA
AVEIWANQRF ARMENHVQLM LKVKPGFGMH SERFMYHTIF PAIREKGVQI VEDNKMCFVR
ARADETVWID DCENPRRVIA AKSIVARMGD KMSRLEQALG RACTTSAEKI HNMWVQDVAN
CSSTK
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