Gene PHATRDRAFT_50107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50107 
Symbol 
ID7198912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp58220 
End bp59843 
Gene Length1624 bp 
Protein Length396 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185040 
Protein GI219129741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000637615 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGCATTCTA AGTCGAGCAG ACGACCGAAG GGGGAATTTC CTTTCAAAAG TAGGCGTTCT 
TGTGGCCCTT TGCTTATCCT CTTTTGCTGC CGCCGAACGA TGAGGGTCAT GACAAAAAAA
GTTGGTGTCT TCTCGCTAAT AGCATTATCA ATCGCGAGTT TCGTGCTCCA GTTTCGTTCT
GCATCGGATA TAAGTAAAGA CGAAGCACTC CTGCACAAAG AGTCCTCGGA CTTCGTCCCG
TGGAATCGGC ATGCCCTCCG GACAGAGCAA GGGTCGCCGA CTGTGACAGG CAAGTGTGCC
ATAAATATGT ACGGGCTACC GAGAGCATTT CAATCTCTCG TTTTGCCTTC ACTCATCAAA
AATGTGATCC AGCCGAACGC CATCTACAGC TGCGACTACT TTGTACACTA TTACAACTTG
ACTGAAGAAA CAGCGGGACG ATCTGGAGGT GGAGGACGTA TAAATCCGGA CGAGATCCTT
TTACTTAAAC AAGCCGTGCA AGACGTCTCT CCGCAGTCGA TCGTGGAATT TCATCACGAC
ACAGAAGCAG CCTTCTGGGA TCGGTATCAA CCCCTTTTAG ACAAGATTCG GACAACTAAA
GCTACTGATG GCCACTATTT GTACTTTCCA TGGCGAGCCA AAACCTACAA ACATCCGATT
ACAACGGACA ATATCATCAA AATGTGGCAC AGTATTCAAT CAGCATGGAA CTTGATGATG
GAACACGAAA CTTTGACATC CCAACCGTAC ACGCGGGTTG CCATGCTACG CTCGGATGTT
GTGTATATGA CACCGATCAA CGTTTTTGAA ATCAGTCGCC GAAAAGTTCT TGACAATGAA
AAAGCAGCCC TTGTCCCCGC TTTTGGGCGG CACCCTGTGA GTGATCGCAT CATCGTGGGG
CCAAGGGATG CGGTCAAAGT GTGGGCGACG GAGCGTTTTG ATCGTCTCGA AACGCACGTG
ACCTTTGTAC AAGAACACAA TCCGGGCTGG GGTATGCATT CGGAAAAGTT TCTGAATTGG
ACAATTTTCC CTGCGATTCG AGAAACGGGG ACATCAATTG TGGAAGACGA CTACTTGTGC
TTCTTTCGCG CTCGTGCCGA TGAGACAGTG TGGATCAAGG ACTGTGAGGG AAAGCACGAA
GGGATCGCAG CGCATTCGAT TCTGAAGAAT CTTGGAGGCA ACAAGAAGCA CGTTTTGGAG
TCCGTACTTG GACGGAAGTG CCTCGACGGA GTGCAGCGCC TCACTCACTC GTTTGCGGCG
GTGCACTGTC CGATGCAGAT GCCACTATAG AGTACTGATG CTTTACAGAA TTTTATTGTT
TTCTTTAGCC ATCGGGAGCT GAGACGTCGA TGACTGCATG AAAGAGGGGC CAGCTTTGAG
CCAGGCACAG GGTTCTATAT CAAGGCATCC ATTCATGATA CCTGTAATGC CAATGCTGTA
TAGAAAGAGG CTGTTTTTGT TATTTCTGAT TCCAGACTAC CAAAAGTAAT CAGGATCGGC
ACACTTGGAG GTCAGATTTC TCGTGATAGA ATAAATTTGA ATGGTTTTGC AGATTCTCCA
CCACGAGTGC GAGTCATCTC CGTGAACCAA AAATTTTTGT TACAATAAAA TTTATTGCCA
TTCT
 
Protein sequence
MRVMTKKVGV FSLIALSIAS FVLQFRSASD ISKDEALLHK ESSDFVPWNR HALRTEQGSP 
TVTGKCAINM YGLPRAFQSL VLPSLIKNVI QPNAIYSCDY FVHYYNLTEE TAGRSGGGGR
INPDEILLLK QAVQDVSPQS IVEFHHDTEA AFWDRYQPLL DKIRTTKATD GHYLYFPWRA
KTYKHPITTD NIIKMWHSIQ SAWNLMMEHE TLTSQPYTRV AMLRSDVVYM TPINVFEISR
RKVLDNEKAA LVPAFGRHPV SDRIIVGPRD AVKVWATERF DRLETHVTFV QEHNPGWGMH
SEKFLNWTIF PAIRETGTSI VEDDYLCFFR ARADETVWIK DCEGKHEGIA AHSILKNLGG
NKKHVLESVL GRKCLDGVQR LTHSFAAVHC PMQMPL