Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50098 |
Symbol | |
ID | 7198905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | - |
Start bp | 30308 |
End bp | 31585 |
Gene Length | 1278 bp |
Protein Length | 341 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185032 |
Protein GI | 219129725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGTATTTCCT GTTAGCTTCG CGGTGCCGTA GCGCGACGCC GACAGAGAAG CCAATCTATA ATAGCTGAAA AGCGCGTGTC ATTACTTCTT CACTTGTTTG ATTCATTCCA CATTTGTCAG TTAGAATGAA GACCCGCAAA GAAGAGGAAA TGCGCAACAA TACAAAAAGT GCAAGTGGAC AGGTGGACAT CTTAGAGCTG CGCAAGTTAC TTACAACAGG CCAAATGAGA TTCGCACCAT TACGTCAGGA GCGATCTATC AGAGCGCAGA TCCAAGGCCT TTCTCAGGAA GGATTGGCAT GCTTTGTTCA CTTAAAAGCC ACATGGGAGA CCTGGTTCCC TAATGACCCC TACGACGATG AAATGTATCT TAGATTTTCT CGATGCAGCC CGGGAAAACC ATTCGACGAA ATATCCGCCT GGAAAAGTAT GAAGCATTTT GATCGCCGTT ACTCAGGGCT GACAGCATCT GCCCTCGAAT TTCAACTACG CACAAAAACT CTGTTTCCAC TACCAGGTCT CCGTACGACT AATCTTCATG AAGTCTTCTA CATGAGACCC GCCCGATTCG TTCCTACAAA CACTCAAACG AAAACCGTGA TTGATAATTT GGTGTATGTC ATGAGCACCA TGATGGAGCG CGAAGGTCCA TGTTCCAACG GAATATCCTT TATTGCCAAC ATGGATGACT GGACTATGAA ATGTTTTACC ACCGACTATT GTCTCCAGTT TATGTTGACG CTCCAAGGAA GAATTCCAGC ACGAGTGACG GGGTTCTTCA TTGTCAATCC TCCATCATGG TTTGGTTCCA TTTGGAAAAT GATGAAACCG ATGCTTTCGC CCCAGTTTCG TAAAAAGGTG TACATGATTC CTGAGGCGGA ACTCAAGCAC CACATGGCGG TCGGCTACGA AAAATTCCTA CCTGATGAGC TGTCGTCTGG CAGAGCTGAT ACAGATTCCA TTGTGTCGGA TTTTGTCGAT TACAGAATGT TTGTCGAAGC CCAGCCCTCC AATGGACAAG GAGACTTGAA AGAAACGGCA AGGAGATTGA AAGGTGGTTC CGCAGATGTA CGTGGAGGAA AACGTCGCAA TCGTCTCATT TTTGGAAGAA AGCAGCCACG AAATACTTCT ACCGTAGAGA GTGAAAAGTA ACAATGGATC CGCGCAATTA CCGACCACCG ACTTTCGTGA ATATTCTACT CACAGTCACC AGAAAATGGC AGGAGCCATC CCACAATCAA AGAAGTGTTG TTAACATATA GTGGCCATTT GGGATGAT
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Protein sequence | MKTRKEEEMR NNTKSASGQV DILELRKLLT TGQMRFAPLR QERSIRAQIQ GLSQEGLACF VHLKATWETW FPNDPYDDEM YLRFSRCSPG KPFDEISAWK SMKHFDRRYS GLTASALEFQ LRTKTLFPLP GLRTTNLHEV FYMRPARFVP TNTQTKTVID NLVYVMSTMM EREGPCSNGI SFIANMDDWT MKCFTTDYCL QFMLTLQGRI PARVTGFFIV NPPSWFGSIW KMMKPMLSPQ FRKKVYMIPE AELKHHMAVG YEKFLPDELS SGRADTDSIV SDFVDYRMFV EAQPSNGQGD LKETARRLKG GSADVRGGKR RNRLIFGRKQ PRNTSTVESE K
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