Gene PHATRDRAFT_50098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50098 
Symbol 
ID7198905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp30308 
End bp31585 
Gene Length1278 bp 
Protein Length341 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185032 
Protein GI219129725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTATTTCCT GTTAGCTTCG CGGTGCCGTA GCGCGACGCC GACAGAGAAG CCAATCTATA 
ATAGCTGAAA AGCGCGTGTC ATTACTTCTT CACTTGTTTG ATTCATTCCA CATTTGTCAG
TTAGAATGAA GACCCGCAAA GAAGAGGAAA TGCGCAACAA TACAAAAAGT GCAAGTGGAC
AGGTGGACAT CTTAGAGCTG CGCAAGTTAC TTACAACAGG CCAAATGAGA TTCGCACCAT
TACGTCAGGA GCGATCTATC AGAGCGCAGA TCCAAGGCCT TTCTCAGGAA GGATTGGCAT
GCTTTGTTCA CTTAAAAGCC ACATGGGAGA CCTGGTTCCC TAATGACCCC TACGACGATG
AAATGTATCT TAGATTTTCT CGATGCAGCC CGGGAAAACC ATTCGACGAA ATATCCGCCT
GGAAAAGTAT GAAGCATTTT GATCGCCGTT ACTCAGGGCT GACAGCATCT GCCCTCGAAT
TTCAACTACG CACAAAAACT CTGTTTCCAC TACCAGGTCT CCGTACGACT AATCTTCATG
AAGTCTTCTA CATGAGACCC GCCCGATTCG TTCCTACAAA CACTCAAACG AAAACCGTGA
TTGATAATTT GGTGTATGTC ATGAGCACCA TGATGGAGCG CGAAGGTCCA TGTTCCAACG
GAATATCCTT TATTGCCAAC ATGGATGACT GGACTATGAA ATGTTTTACC ACCGACTATT
GTCTCCAGTT TATGTTGACG CTCCAAGGAA GAATTCCAGC ACGAGTGACG GGGTTCTTCA
TTGTCAATCC TCCATCATGG TTTGGTTCCA TTTGGAAAAT GATGAAACCG ATGCTTTCGC
CCCAGTTTCG TAAAAAGGTG TACATGATTC CTGAGGCGGA ACTCAAGCAC CACATGGCGG
TCGGCTACGA AAAATTCCTA CCTGATGAGC TGTCGTCTGG CAGAGCTGAT ACAGATTCCA
TTGTGTCGGA TTTTGTCGAT TACAGAATGT TTGTCGAAGC CCAGCCCTCC AATGGACAAG
GAGACTTGAA AGAAACGGCA AGGAGATTGA AAGGTGGTTC CGCAGATGTA CGTGGAGGAA
AACGTCGCAA TCGTCTCATT TTTGGAAGAA AGCAGCCACG AAATACTTCT ACCGTAGAGA
GTGAAAAGTA ACAATGGATC CGCGCAATTA CCGACCACCG ACTTTCGTGA ATATTCTACT
CACAGTCACC AGAAAATGGC AGGAGCCATC CCACAATCAA AGAAGTGTTG TTAACATATA
GTGGCCATTT GGGATGAT
 
Protein sequence
MKTRKEEEMR NNTKSASGQV DILELRKLLT TGQMRFAPLR QERSIRAQIQ GLSQEGLACF 
VHLKATWETW FPNDPYDDEM YLRFSRCSPG KPFDEISAWK SMKHFDRRYS GLTASALEFQ
LRTKTLFPLP GLRTTNLHEV FYMRPARFVP TNTQTKTVID NLVYVMSTMM EREGPCSNGI
SFIANMDDWT MKCFTTDYCL QFMLTLQGRI PARVTGFFIV NPPSWFGSIW KMMKPMLSPQ
FRKKVYMIPE AELKHHMAVG YEKFLPDELS SGRADTDSIV SDFVDYRMFV EAQPSNGQGD
LKETARRLKG GSADVRGGKR RNRLIFGRKQ PRNTSTVESE K