Gene PHATRDRAFT_41088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41088 
Symbol 
ID7198876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011695 
Strand
Start bp326915 
End bp327948 
Gene Length1034 bp 
Protein Length344 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185089 
Protein GI219129843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.309401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCAC CGGTCATGAT CAGCGAGTTT CGCCGGCAAC ATTCTTGGCT TGTAATCTTG 
GCATGCTGTG GTTGGTTGGT GCCATCGACT CTGAGTTTGA CTTCCCCGAT CGCTGCTCCC
ATAGTATCTC CTTCCGTGGT ATTTATCGGG GGTCTCGGCT ATTGTGGTGG ACGGATCGCA
CGTTCCATTC GGGAAGCATA CCCAGACTGT ATAATAGTGG GAAGCGTTCG ATCGAAGGAA
CGGCGGGCGG AACTCTTGTC GAACCAAGGG GAAGGTAGAG ACTTGGCATA CAATGATGTT
TACGTGTTGG ATCTTGACGA TGGATACACA GGCCTGAATA ACGCAGGCCA AGCAAGTCTA
GCATCGGCAA CACACATTAT TCAGACTGTG GCGCCGATCG CCGATCACAA CCAAGACCCA
TTGCTAGCCT TGCATGGAGA TCTTCTTCGA CAGCGAAAGG GTGTAAACCC GTTATGTTGG
GTCGGGTATC TTTCTTCGAC CGGCGTCTAT GGTGATCACC ATGGAGCCTG GGTGACGGAA
GACGAATCTT CAGAGTTGCG GTGCGTCGAT GCCAAATCCC TCGCACGCAT AGAAGCAGAG
TGGCAGTGGC GACAGCTCGA AAAAGCTTCT GGACAAGGCA TCCGTGTAGA CTGTTTTCGC
TGTGGTGGCA TATATGGACC CGGTCGCGGA CCTCTGTTTT CCACTGTAAA TGATTTGCGC
CTTTCCTCTG ATAGCTCTTT GCTGGATCAG ACTCCTAAGT ACGTGAATCG AATTCTGGTA
GACGACATTG CGGGAGCAAT GCTCGCGGCC ATGTCGTCAG ATCGCCCACT ACACAACGGC
CGAGTATACA ATTTGGTCGA CGACAATCCA GCTCCTCGTC GGGACGTCAT TTTGGAAGCT
CGGAAGCTGC GAGGGCTTGT TGACGGGAGC GACGCAAACG ATAACGGGGC CGCCGCTACA
TTCACGGGCC GTTCTCGACC GCCCACTCGC AGCACGGGCA ACAAGCGATG TTGCAATCAA
CGACTAAAGG ACGA
 
Protein sequence
MEAPVMISEF RRQHSWLVIL ACCGWLVPST LSLTSPIAAP IVSPSVVFIG GLGYCGGRIA 
RSIREAYPDC IIVGSVRSKE RRAELLSNQG EGRDLAYNDV YVLDLDDGYT GLNNAGQASL
ASATHIIQTV APIADHNQDP LLALHGDLLR QRKGVNPLCW VGYLSSTGVY GDHHGAWVTE
DESSELRCVD AKSLARIEAE WQWRQLEKAS GQGIRVDCFR CGGIYGPGRG PLFSTVNDLR
LSSDSSLLDQ TPKYVNRILV DDIAGAMLAA MSSDRPLHNG RVYNLVDDNP APRRDVILEA
RKLRGLVDGS DANDNGAAAT FTGRSRPPTR STGNKRCCNQ RLKD